RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 SLC5A4Q9NY91 659 aa11.13□□□□□ -0.63
CPT1A-201ENST00000265641 NAGPAQ9UK23 515 aa11.13□□□□□ -0.63
CPT1A-201ENST00000265641 NAALADL1Q9UQQ1 740 aa11.13□□□□□ -0.63
CPT1A-201ENST00000265641 HEG1Q9ULI3 1381 aa11.13□□□□□ -0.63
CPT1A-201ENST00000265641 PSMD3O43242 534 aa11.13□□□□□ -0.63
CPT1A-201ENST00000265641 PYGLP06737 847 aa11.13□□□□□ -0.63
CPT1A-201ENST00000265641 SPRP35270 261 aaPredicted RBP11.13□□□□□ -0.63
CPT1A-201ENST00000265641 GRM4Q14833 912 aa11.13□□□□□ -0.63
CPT1A-201ENST00000265641 HEATR4Q86WZ0 1026 aa11.13□□□□□ -0.63
CPT1A-201ENST00000265641 TTC30BQ8N4P2 665 aa11.13□□□□□ -0.63
CPT1A-201ENST00000265641 PLEKHG4BQ96PX9 1271 aa11.13□□□□□ -0.63
CPT1A-201ENST00000265641 DCUN1D5Q9BTE7 237 aa11.13□□□□□ -0.63
CPT1A-201ENST00000265641 KDM6AO15550 1401 aaPredicted RBP11.13□□□□□ -0.63
CPT1A-201ENST00000265641 GAS2O43903 313 aaKnown RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ABHD2P08910 425 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 FASP25445 335 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 GALK1P51570 392 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TCP10Q12799 353 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TRAF2Q12933 501 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 CERKLQ49MI3 558 aaPredicted RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ITPRIPL1Q6GPH6 555 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 NCCRP1Q6ZVX7 275 aaPredicted RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 KRT73Q86Y46 540 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 SETD9Q8NE22 299 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.12□□□□□ -0.639e-6■■■□□ 15.7
CPT1A-201ENST00000265641 DYNLL2Q96FJ2 89 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 RBBP8Q99708 897 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TLR10Q9BXR5 811 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 DCLK3Q9C098 648 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 KIAA1683Q9H0B3 1180 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 SNX13Q9Y5W8 968 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 PNPLA7Q6ZV29 1317 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ITSN1Q15811 1721 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 CCNA2P20248 432 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 RAD23AP54725 363 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TP53BP2Q13625 1128 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ZC3H12BQ5HYM0 836 aaKnown RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 RBM20Q5T481 1227 aaKnown RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 IKBIPQ70UQ0 350 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ANKMY2Q8IV38 441 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 FBXL16Q8N461 479 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TTC39CQ8N584 583 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 HDAC7Q8WUI4 952 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 GLG1Q92896 1179 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ATP6V1HQ9UI12 483 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 FADS3Q9Y5Q0 445 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ZNF804BA4D1E1 1349 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 SFI1A8K8P3 1242 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 AQP5P55064 265 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 SNRPFP62306 86 aaKnown RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 RUNDC3AQ59EK9 446 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 MAGEB5Q9BZ81 275 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 XPO7Q9UIA9 1087 aaKnown RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 A0A087X0T9 212 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 LRRIQ4A6NIV6 560 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 OATP04181 439 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 FAM228BP0C875 321 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TSHRP16473 764 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 COMTP21964 271 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 VAMP7P51809 220 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 DPYSQ14117 519 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 CNPY1Q3B7I2 92 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 CMPK2Q5EBM0 449 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 SPANXN2Q5MJ10 180 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ATG9AQ7Z3C6 839 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 SNX31Q8N9S9 440 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TRIM8Q9BZR9 551 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 SEC31BQ9NQW1 1179 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TUBGCP4Q9UGJ1 667 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 GTF3C4Q9UKN8 822 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 SLC12A4Q9UP95 1085 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 BTBD3Q9Y2F9 522 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 VIRMAQ69YN4 1812 aaKnown RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TESPA1A2RU30 521 aaPredicted RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 SAGE2PA6NJ88 616 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 DDX3XO00571 662 aaKnown RBP eCLIP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 CLOCKO15516 846 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 NBNO60934 754 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ZBED4O75132 1171 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TFRCP02786 760 aaKnown RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ME2P23368 584 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ZBTB41Q5SVQ8 909 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 PDPK2PQ6A1A2 396 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 RWDD4Q6NW29 188 aaKnown RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 EXOC3L1Q86VI1 746 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 SRBD1Q8N5C6 995 aaKnown RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ADCY4Q8NFM4 1077 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ZNF75CPQ92670 426 aaPredicted RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 ITPKCQ96DU7 683 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TSPAN17Q96FV3 270 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 FAM20AQ96MK3 541 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 FAM111AQ96PZ2 611 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TMEM47Q9BQJ4 181 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 C11orf70Q9BRQ4 267 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 KLHL31Q9H511 634 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 CCDC59Q9P031 241 aaKnown RBP11.12□□□□□ -0.63
CPT1A-201ENST00000265641 TPRKBQ9Y3C4 175 aa11.12□□□□□ -0.63
CPT1A-201ENST00000265641 CPS1P31327 1500 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 HEATR9A2RTY3 570 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 FAM196BA6NMK8 535 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms