RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PACSIN3Q9UKS6 424 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 FAF1Q9UNN5 650 aaPredicted RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 CTDP1Q9Y5B0 961 aaPredicted RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 PCNTO95613 3336 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 POTEFA5A3E0 1075 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 A8MU76 341 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 E9PMD0 336 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 F8W8V4 182 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 TM7SF2O76062 418 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 TDP2O95551 362 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 CD48P09326 243 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 POTEIP0CG38 1075 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 KRT4P19013 534 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 CTBSQ01459 385 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 SNAPC2Q13487 334 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 TRIP10Q15642 601 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 SPDYAQ5MJ70 313 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 METTL21CQ5VZV1 264 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 POTEEQ6S8J3 1075 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 NSMFQ6X4W1 530 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 TRMT1LQ7Z2T5 733 aaKnown RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 PODNQ7Z5L7 613 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 PIP4K2CQ8TBX8 421 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 SLC26A7Q8TE54 656 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 SLC5A5Q92911 643 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 CCDC124Q96CT7 223 aaKnown RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 CNBD2Q96M20 576 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 OSBPL8Q9BZF1 889 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 TRNAU1APQ9NX07 287 aaKnown RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 TMA7Q9Y2S6 64 aaKnown RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 SYNGAP1Q96PV0 1343 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 SLX4Q8IY92 1834 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 A6NL46 340 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 CAPN14A8MX76 684 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 DDAH1O94760 285 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 MARSP56192 900 aaKnown RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 PSMD6Q15008 389 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 CLPPQ16740 277 aaPredicted RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 TBC1D10BQ4KMP7 808 aaPredicted RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 LZTR1Q8N653 840 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.19□□□□□ -0.94
VAPB-201ENST00000265619 OXNAD1Q96HP4 312 aaPredicted RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 PIGSQ96S52 555 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 CCT7Q99832 543 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 ZHX3Q9H4I2 956 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 TBCCD1Q9NVR7 557 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 ANAPC5Q9UJX4 755 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 COQ6Q9Y2Z9 468 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 HBS1LQ9Y450 684 aaKnown RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 IRS2Q9Y4H2 1338 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 CLIC2O15247 247 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 DNAJA2O60884 412 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 CALML3P27482 149 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 RPL10P27635 214 aaKnown RBP9.18□□□□□ -0.94
VAPB-201ENST00000265619 NCKAP1LP55160 1127 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 UBAP2LQ14157 1087 aaKnown RBP9.18□□□□□ -0.94
VAPB-201ENST00000265619 PPP2R5EQ16537 467 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 FYB2Q5VWT5 728 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 PCNX4Q63HM2 1172 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 ITPRIPL1Q6GPH6 555 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 APOBEC3HQ6NTF7 200 aaKnown RBP9.18□□□□□ -0.94
VAPB-201ENST00000265619 FASTKD5Q7L8L6 764 aaKnown RBP9.18□□□□□ -0.94
VAPB-201ENST00000265619 CCDC110Q8TBZ0 833 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 TBCKQ8TEA7 893 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 SNX29Q8TEQ0 813 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 AK8Q96MA6 479 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 SHCBP1LQ9BZQ2 653 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 TAOK3Q9H2K8 898 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 TRPC7Q9HCX4 862 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 PIM2Q9P1W9 311 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 WHRNQ9P202 907 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 DMTF1Q9Y222 760 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 INPP5FQ9Y2H2 1132 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 DIS3Q9Y2L1 958 aaKnown RBP9.18□□□□□ -0.94
VAPB-201ENST00000265619 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.18□□□□□ -0.94
VAPB-201ENST00000265619 MYPNQ86TC9 1320 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 MAGEC1O60732 1142 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 PLS3P13797 630 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 ADCY8P40145 1251 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 DRAP1Q14919 205 aaPredicted RBP9.18□□□□□ -0.94
VAPB-201ENST00000265619 ARHGAP44Q17R89 818 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 GRAMD1BQ3KR37 738 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 PDCD4Q53EL6 469 aaKnown RBP9.18□□□□□ -0.94
VAPB-201ENST00000265619 ANO5Q75V66 913 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 TCP10LQ8TDR4 215 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 CD101Q93033 1021 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 SNF8Q96H20 258 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 VPS51Q9UID3 782 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 ACTL7BQ9Y614 415 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 K7EPI3 171 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 AP1G1O43747 822 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 TROVE2P10155 538 aaKnown RBP eCLIP9.18□□□□□ -0.948e-6■■■■□ 26.6
VAPB-201ENST00000265619 BGNP21810 368 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 ZNF200P98182 395 aaPredicted RBP9.18□□□□□ -0.94
VAPB-201ENST00000265619 DALRD3Q5D0E6 543 aaKnown RBP9.18□□□□□ -0.94
VAPB-201ENST00000265619 DACT2Q5SW24 774 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 CCDC62Q6P9F0 684 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 SFR1Q86XK3 245 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 NLGN2Q8NFZ4 835 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms