RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 UNC45BQ8IWX7 931 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 PPM1NQ8N819 430 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 MCPH1Q8NEM0 835 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 FBXL18Q96ME1 805 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 CADM1Q9BY67 442 aaKnown RBP13□□□□□ -0.33
CHMP3-201ENST00000263856 JPH1Q9HDC5 661 aaPredicted RBP13□□□□□ -0.33
CHMP3-201ENST00000263856 SPATS2LQ9NUQ6 558 aaKnown RBP13□□□□□ -0.33
CHMP3-201ENST00000263856 RABGEF1Q9UJ41 708 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 QSER1Q2KHR3 1735 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 NRXN2Q9P2S2 1712 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 PMM2O15305 246 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 TYROBPO43914 113 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 BAG2O95816 211 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 PSAPP07602 524 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 LINGO3P0C6S8 592 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 PYGBP11216 843 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 ATP4AP20648 1035 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 PARP6Q2NL67 630 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 SNRNP48Q6IEG0 339 aaKnown RBP13□□□□□ -0.33
CHMP3-201ENST00000263856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13□□□□□ -0.33
CHMP3-201ENST00000263856 PDIK1LQ8N165 341 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 KCTD6Q8NC69 237 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 JOSD2Q8TAC2 188 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 ASAP3Q8TDY4 903 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 INPP5DQ92835 1189 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 TIPINQ9BVW5 301 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 SENP1Q9P0U3 644 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 DOCK5Q9H7D0 1870 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 FAM237BA0A1B0GVD1 139 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 TMEM191CA6NGB0 347 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 ALOX15BO15296 676 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 TMEM63AO94886 807 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 LYPLA2O95372 231 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 APBA3O96018 575 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 TMEM191BP0C7N4 346 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 SRGAP2CP0DJJ0 459 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 MYL2P10916 166 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 CCND2P30279 289 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 RFC1P35251 1148 aaPredicted RBP13□□□□□ -0.33
CHMP3-201ENST00000263856 THOC5Q13769 683 aaKnown RBP13□□□□□ -0.33
CHMP3-201ENST00000263856 PSMD6Q15008 389 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 EEPD1Q7L9B9 569 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 ALYREFQ86V81 257 aaKnown RBP13□□□□□ -0.33
CHMP3-201ENST00000263856 THNSL1Q8IYQ7 743 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 SAMD3Q8N6K7 520 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 TMEM35BQ8NCS4 154 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 CPT1BQ92523 772 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 NMRK1Q9NWW6 199 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 LY75O60449 1722 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 H3BRJ5 948 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 ZC3H11AO75152 810 aaKnown RBP eCLIP12.99□□□□□ -0.33
CHMP3-201ENST00000263856 ZWINTO95229 277 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 GNAZP19086 355 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 RPL22P35268 128 aaKnown RBP12.99□□□□□ -0.33
CHMP3-201ENST00000263856 ELK3P41970 407 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 ACTR2P61160 394 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 FAAP100Q0VG06 881 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 BMPR2Q13873 1038 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 SNX30Q5VWJ9 437 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 PRAMEF18Q5VWM3 479 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 RSBN1LQ6PCB5 846 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-201ENST00000263856 DARS2Q6PI48 645 aaKnown RBP12.99□□□□□ -0.33
CHMP3-201ENST00000263856 C1orf228Q6PIY5 440 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 TRIM72Q6ZMU5 477 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 SLC25A41Q8N5S1 370 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 ZNF395Q9H8N7 513 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-201ENST00000263856 PPARGC1AQ9UBK2 798 aaKnown RBP12.99□□□□□ -0.33
CHMP3-201ENST00000263856 H7C0C1 242 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
CHMP3-201ENST00000263856 GRAP2O75791 330 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 MMP8P22894 467 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 ATP5OP48047 213 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 EIF3EP60228 445 aaKnown RBP12.99□□□□□ -0.33
CHMP3-201ENST00000263856 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
CHMP3-201ENST00000263856 KLC1Q07866 573 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 KBTBD12Q3ZCT8 623 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 RINLQ6ZS11 566 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 PHF13Q86YI8 300 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-201ENST00000263856 PPIL6Q8IXY8 311 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 RILPQ96NA2 401 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 PPP1R16BQ96T49 567 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 TSC22D3Q99576 134 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 PCDH9Q9HC56 1237 aa12.99□□□□□ -0.33
CHMP3-201ENST00000263856 CNTNAP1P78357 1384 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 KBTBD13C9JR72 458 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 MAP3K13O43283 966 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 PEX10O60683 326 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 CCDC22O60826 627 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 UBTFL6P0CB48 400 aaPredicted RBP12.98□□□□□ -0.33
CHMP3-201ENST00000263856 RBP3P10745 1247 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 KRT3P12035 628 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 CDKN2BP42772 138 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 POLE2P56282 527 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 PSMC1P62191 440 aaKnown RBP12.98□□□□□ -0.33
CHMP3-201ENST00000263856 MMRN1Q13201 1228 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 CFAP61Q8NHU2 1237 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 ZNF526Q8TF50 670 aaPredicted RBP12.98□□□□□ -0.33
CHMP3-201ENST00000263856 TTC1Q99614 292 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms