RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 RFC1P35251 1148 aaPredicted RBP16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 FAM47CQ5HY64 1035 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 VSTM1Q6UX27 236 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 SYDE1Q6ZW31 735 aaPredicted RBP16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 ASAP3Q8TDY4 903 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 TSNARE1Q96NA8 513 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 FBXO6Q9NRD1 293 aaPredicted RBP16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 KRT37O76014 449 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 GEMIN4P57678 1058 aaKnown RBP16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 SLC1A5Q15758 541 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 ANKRD20A2Q5SQ80 823 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 ANKRD20A1Q5TYW2 823 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 FAM83AQ86UY5 434 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 TEX13BQ9BXU2 312 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 MRPL4Q9BYD3 311 aaKnown RBP16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 ZC3H7BQ9UGR2 993 aaKnown RBP16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 DNALI1O14645 258 aaPredicted RBP16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 YWHAEP62258 255 aaKnown RBP16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 THOC5Q13769 683 aaKnown RBP16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 TFDP3Q5H9I0 405 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 DNAAF3Q8N9W5 541 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 GRAMD1AQ96CP6 724 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 FERMT1Q9BQL6 677 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 MROH7Q68CQ1 1323 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 LUC7L3O95232 432 aaKnown RBP16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 PGK2P07205 417 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 KRT7P08729 469 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 ADORA2BP29275 332 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 SERPINB3P29508 390 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 ELK3P41970 407 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 NR1H3Q13133 447 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 MMRN1Q13201 1228 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 KLHL38Q2WGJ6 581 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 RSPH3Q86UC2 560 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 EXD1Q8NHP7 514 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 TMC2Q8TDI7 906 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 CENPTQ96BT3 561 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 SMG5Q9UPR3 1016 aaKnown RBP16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 IRS2Q9Y4H2 1338 aa16.95■□□□□ 0.3
PDZRN3-201ENST00000263666 GSTA1P08263 222 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 MYL2P10916 166 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 RNF169Q8NCN4 708 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 LTBP4Q8N2S1 1624 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 CST3P01034 146 aaPredicted RBP16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 ITGB3P05106 788 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 POU5F1Q01860 360 aaKnown RBP16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 TMEM154Q6P9G4 183 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 CAPN9O14815 690 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 PSTPIP1O43586 416 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 PDGFRBP09619 1106 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 ZCCHC18P0CG32 403 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 TAC1P20366 129 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 ZNF200P98182 395 aaPredicted RBP16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 EML3Q32P44 896 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 NLGN2Q8NFZ4 835 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 LMO3Q8TAP4 145 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 ZNF75CPQ92670 426 aaPredicted RBP16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 FIZ1Q96SL8 496 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 NIF3L1Q9GZT8 377 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 ADGRA3Q8IWK6 1321 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 CREB3O43889 395 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 ARL1P40616 181 aaPredicted RBP16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 GRAMD1BQ3KR37 738 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 SLC17A7Q9P2U7 560 aa16.94■□□□□ 0.3
PDZRN3-201ENST00000263666 C19orf81C9J6K1 198 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 MAP3K7O43318 606 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 MED7O43513 233 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 OATP04181 439 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 CXCL8P10145 99 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 GCNT1Q02742 428 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 CRLF3Q8IUI8 442 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 NDUFAF2Q8N183 169 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 PPP4R1Q8TF05 950 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 SCYL1Q96KG9 808 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 TBC1D10AQ9BXI6 508 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 STOML1Q9UBI4 398 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 VCPP55072 806 aaKnown RBP16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 NOMO3P69849 1222 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 MTFR1Q15390 333 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 CHI3L2Q15782 390 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 GLRA4Q5JXX5 417 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 IL31Q6EBC2 164 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 ATP2A3Q93084 1043 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 TSC22D3Q99576 134 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 ADARB2Q9NS39 739 aaKnown RBP16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 TJP2Q9UDY2 1190 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 P4HA1P13674 534 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 LCP1P13796 627 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 RGS9BPQ6ZS82 235 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 DNAJC9Q8WXX5 260 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 SPATS2LQ9NUQ6 558 aaKnown RBP16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 KCNG1Q9UIX4 513 aa16.93■□□□□ 0.3
PDZRN3-201ENST00000263666 LGR5O75473 907 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 SKIP12755 728 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 TCF7P36402 384 aaPredicted RBP16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 FAAP100Q0VG06 881 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 MYBPC2Q14324 1141 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 SLC26A7Q8TE54 656 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 MECRQ9BV79 373 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 SCOCQ9UIL1 159 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms