RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 PKDCCQ504Y2 493 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 DDX42Q86XP3 938 aaKnown RBP eCLIP16.68■□□□□ 0.26
VPS26A-201ENST00000263559 KATNAL2Q8IYT4 538 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 EMC1Q8N766 993 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 NIPA2Q8N8Q9 360 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 MCRS1Q96EZ8 462 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 MOXD2PA6NHM9 499 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 TULP2O00295 520 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 FKTNO75072 461 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 CHRNA3P32297 505 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 TTC27Q6P3X3 843 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 EMBQ6PCB8 327 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 MRPL10Q7Z7H8 261 aaKnown RBP16.68■□□□□ 0.26
VPS26A-201ENST00000263559 CCDC50Q8IVM0 306 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 TRIM51Q9BSJ1 452 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 TSPYL2Q9H2G4 693 aaPredicted RBP16.68■□□□□ 0.26
VPS26A-201ENST00000263559 SNX25Q9H3E2 840 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 HMX1Q9NP08 348 aaPredicted RBP16.68■□□□□ 0.26
VPS26A-201ENST00000263559 ARL5CA6NH57 179 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 HUS1O60921 280 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 THP07101 528 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 FAM153BP0C7A2 387 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 PSMA2P25787 234 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 CYP1B1Q16678 543 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 FAM153CQ494X1 144 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 FAM26DQ5JW98 314 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 CRYBG2Q8N1P7 616 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 UBXN6Q9BZV1 441 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 SLC38A7Q9NVC3 462 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.67■□□□□ 0.26
VPS26A-201ENST00000263559 FAM153AQ9UHL3 310 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 GIT1Q9Y2X7 761 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 E5RJQ4 531 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 RGS7P49802 495 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 DSC3Q14574 896 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
VPS26A-201ENST00000263559 ARHGAP17Q68EM7 881 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 PMF1Q6P1K2 205 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 CCDC137Q6PK04 289 aaKnown RBP16.67■□□□□ 0.26
VPS26A-201ENST00000263559 EXD1Q8NHP7 514 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 IPO4Q8TEX9 1081 aaKnown RBP16.67■□□□□ 0.26
VPS26A-201ENST00000263559 TRPV6Q9H1D0 765 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 FRMPD3Q5JV73 1810 aa16.67■□□□□ 0.26
VPS26A-201ENST00000263559 DAPK3O43293 454 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 RALAP11233 206 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 IBSPP21815 317 aaPredicted RBP16.66■□□□□ 0.26
VPS26A-201ENST00000263559 PTGIRP43119 386 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 DHX34Q14147 1143 aaKnown RBP16.66■□□□□ 0.26
VPS26A-201ENST00000263559 TXNRD3NBQ6F5E7 133 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 ANKS1BQ7Z6G8 1248 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 ADGRF2Q8IZF7 708 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 SLAIN1Q8ND83 568 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 FNIP1Q8TF40 1166 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 SLC35F5Q8WV83 523 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 SEC14L1Q92503 715 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 CAVIN3Q969G5 261 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 RNF25Q96BH1 459 aaPredicted RBP16.66■□□□□ 0.26
VPS26A-201ENST00000263559 TSEN34Q9BSV6 310 aaKnown RBP16.66■□□□□ 0.26
VPS26A-201ENST00000263559 HEMGNQ9BXL5 484 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 VIPAS39Q9H9C1 493 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 KLHL11Q9NVR0 708 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 HESX1Q9UBX0 185 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 PCYOX1Q9UHG3 505 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 HPCAL4Q9UM19 191 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 UTP11Q9Y3A2 253 aaKnown RBP16.66■□□□□ 0.26
VPS26A-201ENST00000263559 CYB561D2O14569 222 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 ZNF623O75123 536 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 CCDC130P13994 396 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 ECHS1P30084 290 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 GRK4P32298 578 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 COILP38432 576 aaPredicted RBP16.66■□□□□ 0.26
VPS26A-201ENST00000263559 SCNN1GP51170 649 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 CUL1Q13616 776 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 FAM102AQ5T9C2 384 aaPredicted RBP16.66■□□□□ 0.26
VPS26A-201ENST00000263559 LRRC38Q5VT99 294 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 OR6B2Q6IFH4 312 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 OSTM1Q86WC4 334 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 TOP6BLQ8N6T0 577 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 ARFGAP1Q8N6T3 406 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 RNF169Q8NCN4 708 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 ADAM2Q99965 735 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 TRAIPQ9BWF2 469 aa16.66■□□□□ 0.26
VPS26A-201ENST00000263559 A0A1W2PQ45 241 aaPredicted RBP16.65■□□□□ 0.26
VPS26A-201ENST00000263559 A0A1W2PQY0 241 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 CLCNKBP51801 687 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 PDE4CQ08493 712 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 HLTFQ14527 1009 aaKnown RBP eCLIP16.65■□□□□ 0.26
VPS26A-201ENST00000263559 FAM183BPQ6ZVS7 135 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 JAMLQ86YT9 394 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 C12orf50Q8NA57 414 aaPredicted RBP16.65■□□□□ 0.26
VPS26A-201ENST00000263559 C1orf54Q8WWF1 131 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 PIWIL1Q96J94 861 aaKnown RBP16.65■□□□□ 0.26
VPS26A-201ENST00000263559 TRIM31Q9BZY9 425 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 DPH5Q9H2P9 285 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 LRRC19Q9H756 370 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 A0A0U1RQF3 1178 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 FAM187AA6NFU0 413 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 PI4K2BG5E9Z4 385 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 CKBP12277 381 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 ADORA2BP29275 332 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms