RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 DENND3A2RUS2 1198 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 E9PBE3 544 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 FOXD2O60548 495 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 KLHL41O60662 606 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 HNRNPCL1O60812 293 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 APRTP07741 180 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 ENO3P13929 434 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 KCNA4P22459 653 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 GNA15P30679 374 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 CCNG2Q16589 344 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 NRF1Q16656 503 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 ACTL9Q8TC94 416 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 PPP4R1Q8TF05 950 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 SRPK1Q96SB4 655 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 RTFDC1Q9BY42 306 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 IMPG2Q9BZV3 1241 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 RMI1Q9H9A7 625 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 HEMK1Q9Y5R4 338 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 ECM29Q5VYK3 1845 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 ARP10275 920 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 FGFR3P22607 806 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 NFIAQ12857 509 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 OASLQ15646 514 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 KLHL38Q2WGJ6 581 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 NLRX1Q86UT6 975 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 ZNF668Q96K58 619 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 FAM20AQ96MK3 541 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 ZC3H12CQ9C0D7 883 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 COMMD3-BMI1R4GMX3 469 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 SLIT3O75094 1523 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 TESPA1A2RU30 521 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 VCLP18206 1134 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 PSMD7P51665 324 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 INHBCP55103 352 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 MRPS22P82650 360 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 SIX1Q15475 284 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 ATG16L1Q676U5 607 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 IL31Q6EBC2 164 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 KCTD6Q8NC69 237 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 PGBD4Q96DM1 585 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 CSRNP1Q96S65 589 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 TEKT3Q9BXF9 490 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 Q9H521 79 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 C15orf38-AP3S2A0A0A6YYH1 394 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 BOLA2-SMG1P6H3BVE0 249 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 CSDE1O75534 798 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 ADRB2P07550 413 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 CFHP08603 1231 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 OTUD4Q01804 1114 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 STX3Q13277 289 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 ORC1Q13415 861 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 TSHZ1Q6ZSZ6 1077 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 ARPINQ7Z6K5 226 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 USP37Q86T82 979 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 FAM136AQ96C01 138 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 NYXQ9GZU5 481 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 MRPL47Q9HD33 250 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 RAB6BQ9NRW1 208 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 BTBD7Q9P203 1132 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 TAGLN3Q9UI15 199 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 INPP5FQ9Y2H2 1132 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 KBTBD13C9JR72 458 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 IPO5O00410 1097 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 KRT37O76014 449 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 CCNG1P51959 295 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 PKNOX1P55347 436 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 PDK1Q15118 436 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 APLFQ8IW19 511 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 MCOLN2Q8IZK6 566 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 C7orf43Q8WVR3 580 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 DNAJC16Q9Y2G8 782 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 DAGLAQ9Y4D2 1042 aa16.63■□□□□ 0.25
PRPF40B-201ENST00000261897 E5RJQ4 531 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 KRT19P08727 400 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 GZMAP12544 262 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 PSMA2P25787 234 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 RFC1P35251 1148 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 SERPINB5P36952 375 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 PRELPP51888 382 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 OSTNP61366 133 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 PSMC5P62195 406 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 FOLH1Q04609 750 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 DNAL1Q4LDG9 190 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 SYDE1Q6ZW31 735 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 DHDDSQ86SQ9 333 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 ZSCAN18Q8TBC5 510 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 DDX4Q9NQI0 724 aaKnown RBP16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 PLA2G4CQ9UP65 541 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 RPS6KL1Q9Y6S9 549 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 XPOTO43592 962 aaKnown RBP16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 SRGAP2CP0DJJ0 459 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 SRGAP2BP0DMP2 458 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 IVDP26440 423 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 FNBP1LQ5T0N5 605 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 LGSNQ5TDP6 509 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 VWA5B1Q5TIE3 1220 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 CCT7Q99832 543 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 VPS11Q9H270 941 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 COPS7BQ9H9Q2 264 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 KMT5AQ9NQR1 393 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms