RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 XKR3Q5GH77 459 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 DNAAF5Q86Y56 855 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 SLC25A41Q8N5S1 370 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 SLC5A5Q92911 643 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 ZNF669Q96BR6 464 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 EPAS1Q99814 870 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 RUSC1Q9BVN2 902 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 PCDH9Q9HC56 1237 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 ACTL7BQ9Y614 415 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 MROH7Q68CQ1 1323 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 E5RI56 91 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 NFIBO00712 420 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 H2AFYO75367 372 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 RARAP10276 462 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 GTF2H1P32780 548 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 KRR1Q13601 381 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 AUHQ13825 339 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 EARS2Q5JPH6 523 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 MOXD1Q6UVY6 613 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 APPL1Q9UKG1 709 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 MED24O75448 989 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 SKIV2L2P42285 1042 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 HSD17B4P51659 736 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 DRG2P55039 364 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 CDK16Q00536 496 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 PDK1Q15118 436 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 DCLK3Q9C098 648 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 NIF3L1Q9GZT8 377 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 TDRD3Q9H7E2 651 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 ARHGEF38Q9NXL2 777 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 KANSL1LA0AUZ9 987 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 E2F8A0AVK6 867 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 UBA6A0AVT1 1052 aaPredicted RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 IQCA1LA6NCM1 817 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 NDUFB10O96000 172 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 RALBP11234 206 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 SF3B3Q15393 1217 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 GSTA3Q16772 222 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 ZNF34Q8IZ26 560 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 SLC20A1Q8WUM9 679 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 WNK4Q96J92 1243 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 PAIP1Q9H074 479 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 GIMAP4Q9NUV9 329 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 COMMD3-BMI1R4GMX3 469 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 RCCD1A6NED2 376 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 FDX1P10109 184 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 PYGMP11217 842 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 ADORA2BP29275 332 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 TPI1P60174 286 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 CCNA1P78396 465 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 PTK2BQ14289 1009 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 COBLL1Q53SF7 1204 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 SYBUQ9NX95 663 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 SLC39A10Q9ULF5 831 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 SLCO1B7G3V0H7 640 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 GYS1P13807 737 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 XPAP23025 273 aaPredicted RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 MYBPC2Q14324 1141 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 RRP1BQ14684 758 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 B3GNT6Q6ZMB0 384 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 KYQ8NBH2 561 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 TNIP2Q8NFZ5 429 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 FAR2Q96K12 515 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 EGFL8Q99944 293 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 DMAP1Q9NPF5 467 aaPredicted RBP11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 PCDHA3Q9Y5H8 950 aa11.25□□□□□ -0.61
CSNK1A1-201ENST00000261798 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 DNALI1O14645 258 aaPredicted RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 ZC3H11AO75152 810 aaKnown RBP eCLIP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 VCAM1P19320 739 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 GPD1P21695 349 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 KCNK10P57789 538 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 ZC3H12BQ5HYM0 836 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 SEL1L3Q68CR1 1132 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 ZFP1Q6P2D0 407 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 TRAF7Q6Q0C0 670 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 CLEC10AQ8IUN9 316 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 CCDC103Q8IW40 242 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 RIN3Q8TB24 985 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 RMND5BQ96G75 393 aaPredicted RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 ELMO2Q96JJ3 720 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 TMEM121Q9BTD3 319 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 TEX12Q9BXU0 123 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 BRD8Q9H0E9 1235 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 SARS2Q9NP81 518 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 FBXO40Q9UH90 709 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 TNS3Q68CZ2 1445 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 EXTL3O43909 919 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 HLA-DPA1P20036 260 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 LBRQ14739 615 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 PKN2Q16513 984 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 PDPK2PQ6A1A2 396 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 EP400NLQ6ZTU2 488 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 HORMAD1Q86X24 394 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 P3H2Q8IVL5 708 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 IL1RL2Q9HB29 575 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 SMIM31A0A1B0GVY4 71 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms