RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 KRT3P12035 628 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 SLC25A11Q02978 314 aaKnown RBP17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 ACVR2BQ13705 512 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 MOGSQ13724 837 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 SGSM1Q2NKQ1 1148 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 LVRNQ6Q4G3 990 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 DLK2Q6UY11 383 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 C3orf62Q6ZUJ4 267 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 VSIG1Q86XK7 387 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 UNC45BQ8IWX7 931 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 TMEM192Q8IY95 271 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 PYROXD1Q8WU10 500 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 L3MBTL3Q96JM7 780 aaPredicted RBP17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 ACO2Q99798 780 aaKnown RBP17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 ALG13Q9NP73 1137 aaKnown RBP17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 PIM2Q9P1W9 311 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 ZNF112Q9UJU3 913 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 STARD13Q9Y3M8 1113 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 FARP1Q9Y4F1 1045 aaPredicted RBP17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 B4GALT5O43286 388 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 TYROBPO43914 113 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 ECM2O94769 699 aaPredicted RBP17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 ALADP13716 330 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 CCNB1P14635 433 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 LACTBP83111 547 aaPredicted RBP17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 PDK4Q16654 411 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 LRRC8CQ8TDW0 803 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 TRAPPC12Q8WVT3 735 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 GRAMD1AQ96CP6 724 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 CPXM1Q96SM3 734 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 MRPL4Q9BYD3 311 aaKnown RBP17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 XYLT2Q9H1B5 865 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 SHOC2Q9UQ13 582 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 SIP14410 1827 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 PIK3R2O00459 728 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 ATP2A1O14983 1001 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 GBP2P32456 591 aaPredicted RBP17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 ICAM3P32942 547 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 RPL22P35268 128 aaKnown RBP17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 LAMTOR4Q0VGL1 99 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 NR1H3Q13133 447 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 HHATQ5VTY9 493 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 TLDC1Q6P9B6 456 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 ZNF449Q6P9G9 518 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 C12orf42Q96LP6 360 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 LRRC37BQ96QE4 947 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 TACO1Q9BSH4 297 aaKnown RBP17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 EBF2Q9HAK2 575 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 UBN1Q9NPG3 1134 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 NRBP2Q9NSY0 501 aa17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 DDX56Q9NY93 547 aaKnown RBP17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 PSMC3IPQ9P2W1 217 aaPredicted RBP17.19■□□□□ 0.34
TM9SF1-201ENST00000261789 MAGEB2O15479 319 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 EDF1O60869 148 aaKnown RBP17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 MAFO75444 373 aaPredicted RBP17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 TMEM63AO94886 807 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 PRKCBP05771 671 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 HOXC6P09630 235 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 EIF4BP23588 611 aaKnown RBP17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 ADRA1DP25100 572 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 GEMIN4P57678 1058 aaKnown RBP17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 PSMC1P62191 440 aaKnown RBP17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 MAPK6Q16659 721 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 RAB6CQ53S08 254 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 ZPBP2Q6X784 338 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 CEP128Q6ZU80 1094 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 FAM71DQ8N9W8 422 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 FBXO36Q8NEA4 188 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 FBF1Q8TES7 1133 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 HSPH1Q92598 858 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 RAB6CQ9H0N0 254 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 METTL5Q9NRN9 209 aaKnown RBP17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 HOXC10Q9NYD6 342 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 HMGXB4Q9UGU5 601 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 CPSF3Q9UKF6 684 aaKnown RBP17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 CEP83Q9Y592 693 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 NUMBLQ9Y6R0 609 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 ABLIM1O14639 778 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 OGTO15294 1046 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 DIAPH2O60879 1101 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 CSDE1O75534 798 aaKnown RBP17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 CBX6O95503 412 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 KDELR1P24390 212 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 RFC5P40937 340 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 OVGP1Q12889 678 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 BBS9Q3SYG4 887 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 TREML2Q5T2D2 321 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 PPP1R2P3Q6NXS1 205 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 DPH6Q7L8W6 267 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 OTOAQ7RTW8 1153 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 RSAD2Q8WXG1 361 aa17.18■□□□□ 0.34
TM9SF1-201ENST00000261789 MGAMO43451 1857 aa17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 C19orf81C9J6K1 198 aa17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 SETDB1Q15047 1291 aa17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 NIPA2Q8N8Q9 360 aa17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 NAT8LQ8N9F0 302 aa17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 ZNF75CPQ92670 426 aaPredicted RBP17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 NLRP4Q96MN2 994 aa17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 TWNKQ96RR1 684 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms