RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 KIF3CO14782 793 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 MAPK13O15264 365 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 DGKZQ13574 1117 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 PDK2Q15119 407 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 MON2Q7Z3U7 1717 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 TTC17Q96AE7 1141 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 FGD4Q96M96 766 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 TRAIPQ9BWF2 469 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 EPS15L1Q9UBC2 864 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 PKP3Q9Y446 797 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 ADAMTSL3P82987 1691 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 SYNCRIPO60506 623 aaKnown RBP14.54□□□□□ -0.08
CDH1-201ENST00000261769 YWHAQP27348 245 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 ITGA7Q13683 1181 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 GPATCH11Q8N954 259 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 CYTH2Q99418 400 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 SEZ6LQ9BYH1 1024 aa14.54□□□□□ -0.08
CDH1-201ENST00000261769 FRMD8Q9BZ67 464 aaPredicted RBP14.54□□□□□ -0.08
CDH1-201ENST00000261769 TIMM13Q9Y5L4 95 aaPredicted RBP14.54□□□□□ -0.08
CDH1-201ENST00000261769 WDR91A4D1P6 747 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 CKBP12277 381 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 RCN2Q14257 317 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 STARD3Q14849 445 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 NOL9Q5SY16 702 aaKnown RBP14.53□□□□□ -0.08
CDH1-201ENST00000261769 TIGD7Q6NT04 549 aaPredicted RBP14.53□□□□□ -0.08
CDH1-201ENST00000261769 SLFN11Q7Z7L1 901 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 LINC00523Q86TU6 105 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 BHMTQ93088 406 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 INPP4AQ96PE3 977 aaPredicted RBP14.53□□□□□ -0.08
CDH1-201ENST00000261769 UBXN6Q9BZV1 441 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 SF3B1O75533 1304 aaKnown RBP eCLIP14.53□□□□□ -0.08
CDH1-201ENST00000261769 PARP4Q9UKK3 1724 aaKnown RBP14.53□□□□□ -0.08
CDH1-201ENST00000261769 PHF2O75151 1096 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 ORC1Q13415 861 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 CCNYL1Q8N7R7 359 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 ATXN3LQ9H3M9 355 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 NSMCE4AQ9NXX6 385 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 HDAC6Q9UBN7 1215 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 VPS9D1Q9Y2B5 631 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 CNTNAP2Q9UHC6 1331 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 RGS4P49798 205 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 NBPF20Q3BBV1 942 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 NOMO2Q5JPE7 1267 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 EARS2Q5JPH6 523 aaKnown RBP14.53□□□□□ -0.08
CDH1-201ENST00000261769 ZDHHC17Q8IUH5 632 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 ZNF557Q8N988 423 aaPredicted RBP14.53□□□□□ -0.08
CDH1-201ENST00000261769 AIPL1Q9NZN9 384 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 TMEM150BA6NC51 233 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 GYPCP04921 128 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 PYGLP06737 847 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 MTF1Q14872 753 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 HIPK3Q9H422 1215 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 SYNDIG1Q9H7V2 258 aa14.53□□□□□ -0.08
CDH1-201ENST00000261769 COL1A2P08123 1366 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 BAZ2BQ9UIF8 2168 aaKnown RBP14.52□□□□□ -0.08
CDH1-201ENST00000261769 GSTA4O15217 222 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 SGPL1O95470 568 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 RHOCP08134 193 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 ITIH2P19823 946 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 KCNA4P22459 653 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 STIP1P31948 543 aaKnown RBP14.52□□□□□ -0.08
CDH1-201ENST00000261769 CTNNB1P35222 781 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 MFN1Q8IWA4 741 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 SPATA4Q8NEY3 305 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 FRMD8P1Q9BZ68 369 aaPredicted RBP14.52□□□□□ -0.08
CDH1-201ENST00000261769 PLAAQ9Y263 795 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 STX7O15400 261 aaKnown RBP14.52□□□□□ -0.08
CDH1-201ENST00000261769 SLURP2P0DP57 97 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 PCK1P35558 622 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 NDST1P52848 882 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 GCNT1Q02742 428 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 CENPCQ03188 943 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 CASP8Q14790 479 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 PCSK7Q16549 785 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 RETSATQ6NUM9 610 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 IPMKQ8NFU5 416 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.52□□□□□ -0.08
CDH1-201ENST00000261769 CIPCQ9C0C6 399 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 PDGFDQ9GZP0 370 aaPredicted RBP14.52□□□□□ -0.08
CDH1-201ENST00000261769 LATS2Q9NRM7 1088 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 VPS28Q9UK41 221 aa14.52□□□□□ -0.08
CDH1-201ENST00000261769 ZNF263O14978 683 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 NR1D1P20393 614 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 CCR1P32246 355 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.52□□□□□ -0.09
CDH1-201ENST00000261769 PTPRN2Q92932 1015 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 SENP8Q96LD8 212 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 VCX3AQ9NNX9 186 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 GTSE1Q9NYZ3 720 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 A0A0G2JLL6 359 aaPredicted RBP14.52□□□□□ -0.09
CDH1-201ENST00000261769 PSTPIP1O43586 416 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 ATP1A1P05023 1023 aaKnown RBP14.52□□□□□ -0.09
CDH1-201ENST00000261769 PAEPP09466 180 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 ITGB5P18084 799 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 SCNN1GP51170 649 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 MRPS25P82663 173 aaKnown RBP14.52□□□□□ -0.09
CDH1-201ENST00000261769 SMTNL2Q2TAL5 461 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 FASTKD1Q53R41 847 aaKnown RBP14.52□□□□□ -0.09
CDH1-201ENST00000261769 C1orf186Q6ZWK4 172 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 PRRT2Q7Z6L0 340 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms