RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 KRT19P08727 400 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 FGFR1P11362 822 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 ACO1P21399 889 aaKnown RBP15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 CCND2P30279 289 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 EMC2Q15006 297 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 WDR72Q3MJ13 1102 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 FYB2Q5VWT5 728 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 NLRP9Q7RTR0 991 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 SAMD3Q8N6K7 520 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 NTPCRQ9BSD7 190 aaKnown RBP15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 CALN1Q9BXU9 219 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 HAPLN2Q9GZV7 340 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 PORCNQ9H237 461 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 HOXC10Q9NYD6 342 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 TJP2Q9UDY2 1190 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 CPA4Q9UI42 421 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 SYNPO2Q9UMS6 1093 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 SRGAP2CP0DJJ0 459 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 TNFSF9P41273 254 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 GDF10P55107 478 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 OTUD4Q01804 1114 aaKnown RBP15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 PLEKHA7Q6IQ23 1121 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 ZC3H18Q86VM9 953 aaKnown RBP15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 FAM13CQ8NE31 585 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 TCP10LQ8TDR4 215 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 ASAP3Q8TDY4 903 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 MTMR12Q9C0I1 747 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 CHMP2BQ9UQN3 213 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 IKBKGQ9Y6K9 419 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 SPDYE5A6NIY4 337 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 PDHXO00330 501 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 TCEA3O75764 348 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 PSMA2P25787 234 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 MYL6P60660 151 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 PSMD6Q15008 389 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 MAPK6Q16659 721 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 MSS51Q4VC12 460 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 APBB1IPQ7Z5R6 666 aaPredicted RBP15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 VSIG10LQ86VR7 867 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 CTAGE3PQ8IX95 158 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 LRRN4Q8WUT4 740 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 HSPH1Q92598 858 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 SLC17A7Q9P2U7 560 aa15.2■□□□□ 0.02
SFSWAP-201ENST00000261674 TTLL13PA6NNM8 815 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 BTBD19C9JJ37 291 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 EDF1O60869 148 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 DCTN3O75935 186 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 TRPC3Q13507 836 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 LRRC6Q86X45 466 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 ALLCQ8N6M5 410 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 FAM71DQ8N9W8 422 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 YIPF3Q9GZM5 350 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 PSMC3IPQ9P2W1 217 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 STARD13Q9Y3M8 1113 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 COL2A1P02458 1487 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 ZC3H11AO75152 810 aaKnown RBP eCLIP15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 VCPP55072 806 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 TFDP3Q5H9I0 405 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 FNBP1LQ5T0N5 605 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 THNSL1Q8IYQ7 743 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 TMEM130Q8N3G9 435 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 FBXO36Q8NEA4 188 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 RFWD2Q8NHY2 731 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 DTX3LQ8TDB6 740 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 TTC25Q96NG3 672 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 TEX13BQ9BXU2 312 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 METTL5Q9NRN9 209 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 TMEM191CA6NGB0 347 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 TMEM191BP0C7N4 346 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 TROVE2P10155 538 aaKnown RBP eCLIP15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 GLRA2P23416 452 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 RFC1P35251 1148 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 CPA2P48052 419 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 YWHAGP61981 247 aaKnown RBP eCLIP15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 PDK4Q16654 411 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 SLC7A3Q8WY07 619 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 BRI3BPQ8WY22 251 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 PAFAH2Q99487 392 aa15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 LAMA2P24043 3122 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-201ENST00000261674 TCRBV7S3A2A0A539 114 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 ENO4A6NNW6 628 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 PLA2G6O60733 806 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 CD48P09326 243 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 GM2AP17900 193 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 MARK3P27448 753 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 CAPRIN2Q6IMN6 1127 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 TRIM72Q6ZMU5 477 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 RFX6Q8HWS3 928 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 PTPN18Q99952 460 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 ARHGAP28Q9P2N2 729 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 HEY2Q9UBP5 337 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 SMG5Q9UPR3 1016 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 KIF1CO43896 1103 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 MMP8P22894 467 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 GEMIN4P57678 1058 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 GPX6P59796 221 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 ZNF252P-AS1Q0IIN9 211 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 NR1H3Q13133 447 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms