RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 WWP1Q9H0M0 922 aa7.57□□□□□ -1.2
CSDE1-201ENST00000261443 C1orf21Q9H246 121 aa7.57□□□□□ -1.2
CSDE1-201ENST00000261443 Q9H521 79 aa7.57□□□□□ -1.2
CSDE1-201ENST00000261443 C17orf75Q9HAS0 396 aa7.57□□□□□ -1.2
CSDE1-201ENST00000261443 SNED1Q8TER0 1413 aa7.57□□□□□ -1.2
CSDE1-201ENST00000261443 CAPN8A6NHC0 703 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 PRR5-ARHGAP8B1AHC4 643 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 I3L4J1 428 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ADCY3O60266 1144 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 LDHBP07195 334 aaKnown RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 KITP10721 976 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 IDO1P14902 403 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 PORP16435 677 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 SLC5A2P31639 672 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 FDFT1P37268 417 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ARHGAP8P85298 464 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 SLC25A3Q00325 362 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 C3orf62Q6ZUJ4 267 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 STXBP4Q6ZWJ1 553 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ANO5Q75V66 913 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 PTF1AQ7RTS3 328 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 AMIGO3Q86WK7 504 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ARID3BQ8IVW6 561 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 PYROXD1Q8WU10 500 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 CORO1BQ9BR76 489 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ANO3Q9BYT9 981 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 TSPYL2Q9H2G4 693 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 PARVGQ9HBI0 331 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 THEGQ9P2T0 379 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 STRIP2Q9ULQ0 834 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 DTNAQ9Y4J8 743 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 TNRC6CQ9HCJ0 1690 aaKnown RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 DHRS4L1P0CG22 281 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 CYP11B1P15538 503 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 RAG1P15918 1043 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 CD58P19256 250 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 MTTPP55157 894 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 EIF6P56537 245 aaKnown RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 PPP3CAQ08209 521 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 CCNIQ14094 377 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 KRT81Q14533 505 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 TBCCQ15814 346 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 HIF1AQ16665 826 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 CCDC142Q17RM4 750 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 KLHL38Q2WGJ6 581 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 RABGAP1LQ5R372 815 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 KAZNQ674X7 775 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 FAM178BQ8IXR5 827 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 MARVELD2Q8N4S9 558 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 OGFOD1Q8N543 542 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 MZB1Q8WU39 189 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 JADE3Q92613 823 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 CCDC124Q96CT7 223 aaKnown RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ACAP3Q96P50 834 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 CCDC106Q9BWC9 280 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 SENP6Q9GZR1 1112 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ZNF180Q9UJW8 692 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 DNPEPQ9ULA0 475 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ATF5Q9Y2D1 282 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 CLUHO75153 1309 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 SPATA31A5Q5VU36 1347 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 SPATA31A6Q5VVP1 1343 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 SPATA31A7Q8IWB4 1347 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 E9PBE3 544 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 RGL2O15211 777 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 LIASO43766 372 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 TNFAIP8O95379 198 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 IL1BP01584 269 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 C6orf222P0C671 652 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 EEF2P13639 858 aaKnown RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ALOX15P16050 662 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 GLRA2P23416 452 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 SLC16A2P36021 539 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ETV4P43268 484 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 VAMP7P51809 220 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 EVA1CP58658 441 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 EPC2Q52LR7 807 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ZNF720Q7Z2F6 126 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 PATL1Q86TB9 770 aaKnown RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 PASD1Q8IV76 773 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 CROCCP3Q8IVE0 287 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 BBS5Q8N3I7 341 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ATP11CQ8NB49 1132 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 DCAKDQ8WVC6 231 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 USP6NLQ92738 828 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 ABHD8Q96I13 439 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 PRPF18Q99633 342 aaKnown RBP7.56□□□□□ -1.2
CSDE1-201ENST00000261443 PCIF1Q9H4Z3 704 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 PLK2Q9NYY3 685 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 TMOD2Q9NZR1 351 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 FETUBQ9UGM5 382 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 APPL1Q9UKG1 709 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 INPP5FQ9Y2H2 1132 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 MAD1L1Q9Y6D9 718 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 AK5Q9Y6K8 562 aa7.56□□□□□ -1.2
CSDE1-201ENST00000261443 TAF1LQ8IZX4 1826 aa7.55□□□□□ -1.2
CSDE1-201ENST00000261443 CYP3A7-CYP3A51PA0A087WV96 503 aa7.55□□□□□ -1.2
CSDE1-201ENST00000261443 DENND3A2RUS2 1198 aa7.55□□□□□ -1.2
CSDE1-201ENST00000261443 TTLL13PA6NNM8 815 aa7.55□□□□□ -1.2
CSDE1-201ENST00000261443 H3BSA7 217 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms