RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 PLAGL2Q9UPG8 496 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 DAAM1Q9Y4D1 1078 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 ALPK3Q96L96 1907 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 TNNC2P02585 160 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 FAM153BP0C7A2 387 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 NQO1P15559 274 aaKnown RBP19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 RFX1P22670 979 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 FAAP100Q0VG06 881 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 RAPGEF1Q13905 1077 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 DSC3Q14574 896 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 TMEM132DQ14C87 1099 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 FAM153CQ494X1 144 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 PI4K2AQ9BTU6 479 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 IFIH1Q9BYX4 1025 aaKnown RBP19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 RNF39Q9H2S5 420 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 EPB41L5Q9HCM4 733 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 FAM153AQ9UHL3 310 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 DNAJC12Q9UKB3 198 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 C2CD2Q9Y426 696 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 MICAL3Q7RTP6 2002 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 UMODL1Q5DID0 1318 aa19.98■□□□□ 0.79
COL4A3BP-201ENST00000261415 NCOA4Q13772 614 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 SCARA3Q6AZY7 606 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 WDR59Q6PJI9 974 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 ALKAL1Q6UXT8 129 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 NT5C1BQ96P26 610 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 ZC3H11AO75152 810 aaKnown RBP eCLIP19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 HNRNPH3P31942 346 aaKnown RBP19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 JAM2P57087 298 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 LMNB2Q03252 620 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 CMPK2Q5EBM0 449 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 PPP1R15BQ5SWA1 713 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 NT5DC4Q86YG4 428 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 IFT81Q8WYA0 676 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 ELMO3Q96BJ8 720 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 TRAIPQ9BWF2 469 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 UBE2TQ9NPD8 197 aaPredicted RBP19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 CNTN3Q9P232 1028 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 PARP2Q9UGN5 583 aa19.97■□□□□ 0.79
COL4A3BP-201ENST00000261415 MACROD2A1Z1Q3 448 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 HEXIM1O94992 359 aaKnown RBP19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 PPM1KQ8N3J5 372 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 KIF12Q96FN5 646 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 ZMAT2Q96NC0 199 aaKnown RBP19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 ADAM2Q99965 735 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 FAM167BQ9BTA0 163 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 HIPK3Q9H422 1215 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 KLK14Q9P0G3 267 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 ATP11BQ9Y2G3 1177 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 EVI5O60447 810 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 NBNO60934 754 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 CST3P01034 146 aaPredicted RBP19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 GLI1P08151 1106 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 CFAP221Q4G0U5 840 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 C1orf127Q8N9H9 656 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 LRRC45Q96CN5 670 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 C1orf112Q9NSG2 853 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 TFR2Q9UP52 801 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 DERAQ9Y315 318 aa19.96■□□□□ 0.79
COL4A3BP-201ENST00000261415 RCCD1A6NED2 376 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 GUCY2DQ02846 1103 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 GPNMBQ14956 572 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 WDR44Q5JSH3 913 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 SFMBT2Q5VUG0 894 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 GPIHBP1Q8IV16 184 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 HELQQ8TDG4 1101 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 SYN2Q92777 582 aaPredicted RBP19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 STK33Q9BYT3 514 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 MEIS3P2A8K0S8 358 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 F8VZ95 297 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 CREB3O43889 395 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 GUCY2FP51841 1108 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 ATP11AP98196 1134 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 TRPC3Q13507 836 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 DRAP1Q14919 205 aaPredicted RBP19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 SPA17Q15506 151 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 ARHGAP44Q17R89 818 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 XKR4Q5GH76 650 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 GLRA4Q5JXX5 417 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 SPOPLQ6IQ16 392 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 NECAB2Q7Z6G3 386 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 HACE1Q8IYU2 909 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 TMEM130Q8N3G9 435 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 KAT5Q92993 513 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 IMPG2Q9BZV3 1241 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 GPR88Q9GZN0 384 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 SIX4Q9UIU6 781 aa19.95■□□□□ 0.78
COL4A3BP-201ENST00000261415 A0A0U1RQF3 1178 aa19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 ZNF623O75123 536 aa19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 ITGB3P05106 788 aa19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 ITGA4P13612 1032 aa19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 TPP2P29144 1249 aaPredicted RBP19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 NOP14P78316 857 aaKnown RBP19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 MRPS25P82663 173 aaKnown RBP19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 SFSWAPQ12872 951 aaKnown RBP19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 SETDB1Q15047 1291 aa19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 LRRC26Q2I0M4 334 aa19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 TRPM8Q7Z2W7 1104 aa19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 KREMEN1Q96MU8 473 aa19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 PPP1R12CQ9BZL4 782 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms