RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 CST3P01034 146 aaPredicted RBP18.1■□□□□ 0.49
CGREF1-201ENST00000260595 TNNC2P02585 160 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 PCSK1P29120 753 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 ID4P47928 161 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 CCR3P51677 355 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 SATB1Q01826 763 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 SNRNP35Q16560 246 aaKnown RBP18.1■□□□□ 0.49
CGREF1-201ENST00000260595 RESP18Q5W5W9 173 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 ATL3Q6DD88 541 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 TRAPPC11Q7Z392 1133 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 MON1AQ86VX9 555 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 NELFCDQ8IXH7 590 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 RDH13Q8NBN7 331 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 RIN3Q8TB24 985 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 TRMT2BQ96GJ1 504 aaKnown RBP18.1■□□□□ 0.49
CGREF1-201ENST00000260595 FUBP3Q96I24 572 aaKnown RBP eCLIP18.1■□□□□ 0.49
CGREF1-201ENST00000260595 GZF1Q9H116 711 aaPredicted RBP18.1■□□□□ 0.49
CGREF1-201ENST00000260595 GKN1Q9NS71 199 aa18.1■□□□□ 0.49
CGREF1-201ENST00000260595 EP300Q09472 2414 aaPredicted RBP18.1■□□□□ 0.49
CGREF1-201ENST00000260595 PVALEFA0A1B0GWK0 134 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 WARSP23381 471 aaKnown RBP18.09■□□□□ 0.49
CGREF1-201ENST00000260595 AVPR1AP37288 418 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 CXCL12P48061 93 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 SNRPFP62306 86 aaKnown RBP18.09■□□□□ 0.49
CGREF1-201ENST00000260595 CYP24A1Q07973 514 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 CUL4BQ13620 913 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 PSMD6Q15008 389 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 BMT2Q1RMZ1 405 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 Q6ZS52 159 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 SPATA2LQ8IUW3 424 aaPredicted RBP18.09■□□□□ 0.49
CGREF1-201ENST00000260595 SPEM1Q8N4L4 309 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 CRTAC1Q9NQ79 661 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 HPS4Q9NQG7 708 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 TDP1Q9NUW8 608 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 THG1LQ9NWX6 298 aaKnown RBP18.09■□□□□ 0.49
CGREF1-201ENST00000260595 FAM13BQ9NYF5 915 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 RCOR1Q9UKL0 485 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 CDH9Q9ULB4 789 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 OTOGLQ3ZCN5 2332 aa18.09■□□□□ 0.49
CGREF1-201ENST00000260595 GPR179Q6PRD1 2367 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 OTOL1A6NHN0 477 aaPredicted RBP18.08■□□□□ 0.48
CGREF1-201ENST00000260595 MAGEA11P43364 429 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 ME1P48163 572 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 CYP2J2P51589 502 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 NRLP54845 237 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 DNM1Q05193 864 aaKnown RBP18.08■□□□□ 0.48
CGREF1-201ENST00000260595 CCINQ13939 588 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 LRRC32Q14392 662 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 PON2Q15165 354 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 ITPRIPL2Q3MIP1 535 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 DGKKQ5KSL6 1271 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 C12orf56Q8IXR9 622 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 XXYLT1Q8NBI6 393 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 ZNF516Q92618 1163 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 MRPS31Q92665 395 aaKnown RBP18.08■□□□□ 0.48
CGREF1-201ENST00000260595 RMDN1Q96DB5 314 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 CHFRQ96EP1 664 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 CGRRF1Q99675 332 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 HINFPQ9BQA5 517 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 SYT15Q9BQS2 421 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 KIF9Q9HAQ2 790 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 SLC39A2Q9NP94 309 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 C2orf42Q9NWW7 574 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 UXTQ9UBK9 157 aaPredicted RBP18.08■□□□□ 0.48
CGREF1-201ENST00000260595 R3HCC1Q9Y3T6 440 aaKnown RBP18.08■□□□□ 0.48
CGREF1-201ENST00000260595 NME7Q9Y5B8 376 aa18.08■□□□□ 0.48
CGREF1-201ENST00000260595 ZNF292O60281 2723 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 K7ESF4 209 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 KLRC4O43908 158 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 PAPSS2O95340 614 aaPredicted RBP18.07■□□□□ 0.48
CGREF1-201ENST00000260595 HSP90AA1P07900 732 aaKnown RBP18.07■□□□□ 0.48
CGREF1-201ENST00000260595 DLATP10515 647 aaKnown RBP18.07■□□□□ 0.48
CGREF1-201ENST00000260595 AFMP43652 599 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 PSMC1P62191 440 aaKnown RBP18.07■□□□□ 0.48
CGREF1-201ENST00000260595 RUNX3Q13761 415 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 ZNF268Q14587 947 aaPredicted RBP18.07■□□□□ 0.48
CGREF1-201ENST00000260595 PPP2R5DQ14738 602 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 TRIM68Q6AZZ1 485 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 GRAMD1CQ8IYS0 662 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 MYLPFQ96A32 169 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 CCDC127Q96BQ5 260 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 SLC22A12Q96S37 553 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 CFAP45Q9UL16 551 aa18.07■□□□□ 0.48
CGREF1-201ENST00000260595 SMG5Q9UPR3 1016 aaKnown RBP18.07■□□□□ 0.48
CGREF1-201ENST00000260595 DCHS1Q96JQ0 3298 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 PDGFRBP09619 1106 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 FAM163BP0C2L3 166 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 TNNI1P19237 187 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 FOXK2Q01167 660 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 DMWDQ09019 674 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 KNOP1Q1ED39 458 aaKnown RBP18.06■□□□□ 0.48
CGREF1-201ENST00000260595 C4orf50Q6ZRC1 276 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 HS2ST1Q7LGA3 356 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 SCN4BQ8IWT1 228 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 SYNPOQ8N3V7 929 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 PLEKHO2Q8TD55 490 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 SPATA17Q96L03 361 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 FNBP1Q96RU3 617 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 CYP2S1Q96SQ9 504 aa18.06■□□□□ 0.48
CGREF1-201ENST00000260595 MMS19Q96T76 1030 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms