RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 TMC3Q7Z5M5 1100 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 CREG2Q8IUH2 290 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 FBXO36Q8NEA4 188 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 CAPSLQ8WWF8 208 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 ASZ1Q8WWH4 475 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 SPIRE2Q8WWL2 714 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 GCNAQ96QF7 691 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 PPCSQ9HAB8 311 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 CLIC5Q9NZA1 410 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 CST8O60676 142 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 PGM3O95394 542 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 NDUFB10O96000 172 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 CENPPQ6IPU0 288 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 METTL23Q86XA0 190 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 SMAD5Q99717 465 aaKnown RBP10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 TLR10Q9BXR5 811 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 PCDHA10Q9Y5I2 948 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 PDE2AO00408 941 aaPredicted RBP10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 ASNA1O43681 348 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 MYBL2P10244 700 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 BMP6P22004 513 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 PTDSS1P48651 473 aaKnown RBP10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 TRMT5Q32P41 509 aaKnown RBP10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 CATSPER4Q7RTX7 472 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 HDDC2Q7Z4H3 204 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 P3H2Q8IVL5 708 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 SPATA18Q8TC71 538 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 ADGRA2Q96PE1 1338 aa10.14□□□□□ -0.79
CTDSPL2-201ENST00000260327 RIPK2O43353 540 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 MMP10P09238 476 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 PSMA4P25789 261 aaKnown RBP10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 ABCE1P61221 599 aaKnown RBP10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 PPIL6Q8IXY8 311 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 POU5F2Q8N7G0 328 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 NSUN6Q8TEA1 469 aaKnown RBP10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 PYDC1Q8WXC3 89 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 MRPL4Q9BYD3 311 aaKnown RBP10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 RNPEPL1Q9HAU8 725 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 SALL1Q9NSC2 1324 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 COL3A1P02461 1466 aaPredicted RBP10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 DFFAO00273 331 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 PEX1O43933 1283 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 BCL10O95999 233 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 XPAP23025 273 aaPredicted RBP10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 FNTAP49354 379 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 CENPCQ03188 943 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 WASHC5Q12768 1159 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 DCTN2Q13561 401 aaKnown RBP10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 SEC23AQ15436 765 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 DSTYKQ6XUX3 929 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 ZBTB49Q6ZSB9 765 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 ADGRA1Q86SQ6 560 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 RNF148Q8N7C7 305 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 FLAD1Q8NFF5 587 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 AGPAT3Q9NRZ7 376 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 ADGRA3Q8IWK6 1321 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 DEPDC5O75140 1603 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 TAP1Q03518 808 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 NCOA4Q13772 614 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 CYP4A22Q5TCH4 519 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 USP33Q8TEY7 942 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 FAM192AQ9GZU8 254 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 TAF4O00268 1085 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 POLRMTO00411 1230 aaKnown RBP10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 CDH2P19022 906 aaPredicted RBP10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 ITGADQ13349 1161 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 PLEKHM3Q6ZWE6 761 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 LUZP2Q86TE4 346 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 TMEM245Q9H330 911 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 NSMCE4AQ9NXX6 385 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 USE1Q9NZ43 259 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 KIAA1210Q9ULL0 1709 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 PTPRUQ92729 1446 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 PSMG1O95456 288 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 KIZQ2M2Z5 673 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 ZBTB46Q86UZ6 589 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 PAFAH2Q99487 392 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 TMEM161AQ9NX61 479 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 RNF103O00237 685 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 PDGFRAP16234 1089 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 KRT72Q14CN4 511 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 SPDYAQ5MJ70 313 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 PDPK2PQ6A1A2 396 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 C11orf63Q6NUN7 778 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 PPP4R4Q6NUP7 873 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 B3GNT6Q6ZMB0 384 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 FOXP3Q9BZS1 431 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 KCND1Q9NSA2 647 aa10.13□□□□□ -0.79
CTDSPL2-201ENST00000260327 CFAP99D6REC4 459 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 KPNA4O00629 521 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 FCHO1O14526 889 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 EIF3DO15371 548 aaKnown RBP eCLIP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 ENTPD5O75356 428 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 AVPR1AP37288 418 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 PEX5P50542 639 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 TRAF2Q12933 501 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 SPP2Q13103 211 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 ATP8B4Q8TF62 1192 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 SLC20A1Q8WUM9 679 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 DCPSQ96C86 337 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms