RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 C2orf71A6NGG8 1288 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 A6NJR5 290 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 LGR5O75473 907 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 ITGA2BP08514 1039 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 HARSP12081 509 aaKnown RBP12.05□□□□□ -0.48
TROAP-201ENST00000257909 ATF7P17544 494 aaPredicted RBP12.05□□□□□ -0.48
TROAP-201ENST00000257909 GTF2H1P32780 548 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 USP46P62068 366 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 GPSM2P81274 684 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 GTF2BQ00403 316 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 SLC18A2Q05940 514 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 SLC30A10Q6XR72 485 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 RAPH1Q70E73 1250 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 TREML1Q86YW5 311 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 PALM2Q8IXS6 379 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 PPIL6Q8IXY8 311 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 ZSWIM2Q8NEG5 633 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 C7orf26Q96N11 449 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 SLITRK1Q96PX8 696 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 ST6GALNAC4Q9H4F1 302 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 ETNK2Q9NVF9 386 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 PPARGC1AQ9UBK2 798 aaKnown RBP12.05□□□□□ -0.48
TROAP-201ENST00000257909 SUGT1Q9Y2Z0 365 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 BTBD19C9JJ37 291 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 SGK1O00141 431 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 AP1G1O43747 822 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 ZC3H11AO75152 810 aaKnown RBP eCLIP12.04□□□□□ -0.484e-6■■■■■ 30.4
TROAP-201ENST00000257909 KRT10P13645 584 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 DESP17661 470 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 STIP1P31948 543 aaKnown RBP12.04□□□□□ -0.48
TROAP-201ENST00000257909 SNAP25P60880 206 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 KDSRQ06136 332 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 MAMLD1Q13495 774 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.04□□□□□ -0.48
TROAP-201ENST00000257909 ZFYVE27Q5T4F4 411 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 ACBD5Q5T8D3 534 aaPredicted RBP12.04□□□□□ -0.48
TROAP-201ENST00000257909 HAUS6Q7Z4H7 955 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 TAS1R2Q8TE23 839 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 CCDC127Q96BQ5 260 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 MPP4Q96JB8 637 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 KLHL4Q9C0H6 718 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 UNC45AQ9H3U1 944 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 SNCAIPQ9Y6H5 919 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 IKBKGQ9Y6K9 419 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 GOLGA8IPA6NC78 632 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 GOLGA8JA6NMD2 632 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 E7ESA3 106 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 GOLGA8SH3BPF8 625 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 GOLGA8MH3BSY2 632 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 BANF1O75531 89 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 CSDE1O75534 798 aaKnown RBP12.04□□□□□ -0.48
TROAP-201ENST00000257909 USP1O94782 785 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 CCNFP41002 786 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 ECE1P42892 770 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 IRX4P78413 519 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
TROAP-201ENST00000257909 HIC1Q14526 733 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 ATG16L1Q676U5 607 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 PPP1R2P3Q6NXS1 205 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 TRIM72Q6ZMU5 477 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 PRPF39Q86UA1 669 aaKnown RBP12.04□□□□□ -0.48
TROAP-201ENST00000257909 CBWD2Q8IUF1 395 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 FBXO27Q8NI29 283 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 TMC2Q8TDI7 906 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 IRGQQ8WZA9 623 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 CLPTM1LQ96KA5 538 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 TEKT3Q9BXF9 490 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 IP6K2Q9UHH9 426 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 GGA1Q9UJY5 639 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 EXOC7Q9UPT5 735 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 SORCS3Q9UPU3 1222 aa12.04□□□□□ -0.48
TROAP-201ENST00000257909 TLR3O15455 904 aaKnown RBP12.03□□□□□ -0.48
TROAP-201ENST00000257909 PFDN1O60925 122 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 IFNB1P01574 187 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 SPATA31D3P0C874 917 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 VCLP18206 1134 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 PTPN7P35236 360 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 GRIA2P42262 883 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 PTK7Q13308 1070 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 AOC3Q16853 763 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 PLEKHA7Q6IQ23 1121 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 LLGL2Q6P1M3 1020 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 KLC3Q6P597 504 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 SPATA31D4Q6ZUB0 917 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 SATL1Q86VE3 508 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 RHPN2Q8IUC4 686 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 FBXO36Q8NEA4 188 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 SENP7Q9BQF6 1050 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 ZNF577Q9BSK1 485 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 IQCGQ9H095 443 aaKnown RBP12.03□□□□□ -0.48
TROAP-201ENST00000257909 SUDS3Q9H7L9 328 aaPredicted RBP12.03□□□□□ -0.48
TROAP-201ENST00000257909 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.03□□□□□ -0.48
TROAP-201ENST00000257909 SOX13Q9UN79 622 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 PPME1Q9Y570 386 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 KRT1P04264 644 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 SCNN1BP51168 640 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 CHN2P52757 468 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 INHBCP55103 352 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 PLCB3Q01970 1234 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms