RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PPP2R2DQ66LE6 453 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 JADE1Q6IE81 842 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 FAM9CQ8IZT9 166 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 LRRC52Q8N7C0 313 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 LRRC8CQ8TDW0 803 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 LRRC37BQ96QE4 947 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 CAPN11Q9UMQ6 739 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 SLC2A4P14672 509 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 GUCY1A2P33402 732 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 ZNF438Q7Z4V0 828 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 ANXA11P50995 505 aaKnown RBP14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 ITGA9Q13797 1035 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 PSMD5Q16401 504 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 SUGP1Q8IWZ8 645 aaKnown RBP14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 FAXDC2Q96IV6 333 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 NDFIP2Q9NV92 336 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 KLHL11Q9NVR0 708 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 DRG1Q9Y295 367 aaKnown RBP14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 HIRAP54198 1017 aaPredicted RBP14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 PPP1R15BQ5SWA1 713 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 PID1Q7Z2X4 250 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 MAP4K3Q8IVH8 894 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 GPR63Q9BZJ6 419 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 ARHGAP10A1A4S6 786 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 QSOX1O00391 747 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 NVLO15381 856 aaKnown RBP14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 MYBP10242 640 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 RARRES1P49788 294 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 CNTN2Q02246 1040 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 POU5F1BQ06416 359 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 KCNA10Q16322 511 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 ZNF720Q7Z2F6 126 aa14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 MYLK4Q86YV6 388 aaPredicted RBP14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 SAMSN1Q9NSI8 373 aaKnown RBP14.03□□□□□ -0.16
PRPF38A-201ENST00000257181 SLC12A8A0AV02 714 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 PSTPIP1O43586 416 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 CXCL14O95715 111 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 PGK1P00558 417 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 ADCY2Q08462 1091 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 PASD1Q8IV76 773 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 AGXT2Q9BYV1 514 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 INTS13Q9NVM9 706 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 SNTG2Q9NY99 539 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 LRRC53A6NM62 1247 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 NDUFS3O75489 264 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 FAM163BP0C2L3 166 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 TEAD4Q15561 434 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 MCUR1Q96AQ8 359 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 LENG9Q96B70 501 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 CLMNQ96JQ2 1002 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 KLK14Q9P0G3 267 aa14.02□□□□□ -0.16
PRPF38A-201ENST00000257181 TRIM49P0CI25 452 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 TRIM49CP0CI26 452 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 COPS2P61201 443 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 IRX5P78411 483 aaPredicted RBP14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 TUSC3Q13454 348 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 LRRC32Q14392 662 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 HECTD3Q5T447 861 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 NXNQ6DKJ4 435 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 ADGRA1Q86SQ6 560 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 ECT2Q9H8V3 914 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 SCUBE2Q9NQ36 999 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 TBC1D13Q9NVG8 400 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 TMEM63CQ9P1W3 806 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 KLHL14Q9P2G3 628 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 TPX2Q9ULW0 747 aaKnown RBP14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 MAFFQ9ULX9 164 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 ATG13O75143 517 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 CRTAMO95727 393 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 KELP23276 732 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 TBX4P57082 545 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 IMPG1Q17R60 797 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 TREML2Q5T2D2 321 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 THEMIS2Q5TEJ8 643 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 TTC39BQ5VTQ0 682 aaPredicted RBP14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 GPAT2Q6NUI2 795 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 CYFIP2Q96F07 1278 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 VCPIP1Q96JH7 1222 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 ADAMTS1Q9UHI8 967 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 DNMT3LQ9UJW3 386 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 HEY1Q9Y5J3 304 aa14.02□□□□□ -0.17
PRPF38A-201ENST00000257181 ATP1A1P05023 1023 aaKnown RBP14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 KRT16P08779 473 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 IL17RBQ9NRM6 502 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 RNF186Q9NXI6 227 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 ZNF112Q9UJU3 913 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 TMEM253P0C7T8 217 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 SAT1P21673 171 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 SHC4Q6S5L8 630 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 TRIM67Q6ZTA4 783 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 EGFL8Q99944 293 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 TTPALQ9BTX7 342 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 SCAF8Q9UPN6 1271 aaKnown RBP14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 HGSO14964 777 aaPredicted RBP14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 FGF10O15520 208 aaPredicted RBP14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 CYP26A1O43174 497 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 APODP05090 189 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 HOXB8P17481 243 aaPredicted RBP14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 ITGALP20701 1170 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms