RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 HPCAL4Q9UM19 191 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 PCDHA3Q9Y5H8 950 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 TMEM191CA6NGB0 347 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 PYGMP11217 842 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 CCDC130P13994 396 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 CTNNA2P26232 953 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 PSMC1P62191 440 aaKnown RBP19.96■□□□□ 0.79
TRIM47-201ENST00000254816 OGDHQ02218 1023 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 ZNF252P-AS1Q0IIN9 211 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 KCTD19Q17RG1 926 aaPredicted RBP19.96■□□□□ 0.79
TRIM47-201ENST00000254816 PPP1R15BQ5SWA1 713 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 DCUN1D2Q6PH85 259 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 LRRC8DQ7L1W4 858 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 TMEM59LQ9UK28 342 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 RGS7P49802 495 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 LLGL1Q15334 1064 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 CCDC142Q17RM4 750 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 HSP90B2PQ58FF3 399 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 WSCD1Q658N2 575 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 LIMS2Q7Z4I7 341 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 XYLT1Q86Y38 959 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 C3orf20Q8ND61 904 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 PGBD4Q96DM1 585 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 STRIP2Q9ULQ0 834 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 NR2E1Q9Y466 385 aa19.96■□□□□ 0.79
TRIM47-201ENST00000254816 TET1Q8NFU7 2136 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 CCDC66A2RUB6 948 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 KRIT1O00522 736 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 ACAT1P24752 427 aaKnown RBP19.95■□□□□ 0.78
TRIM47-201ENST00000254816 ADORA2BP29275 332 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 ATN1P54259 1190 aaPredicted RBP19.95■□□□□ 0.78
TRIM47-201ENST00000254816 TAS2R40P59535 323 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 PAN2Q504Q3 1202 aaKnown RBP19.95■□□□□ 0.78
TRIM47-201ENST00000254816 ZNF598Q86UK7 904 aaKnown RBP19.95■□□□□ 0.78
TRIM47-201ENST00000254816 JOSD2Q8TAC2 188 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 SENP8Q96LD8 212 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 RGS18Q9NS28 235 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 TIMM13Q9Y5L4 95 aaPredicted RBP19.95■□□□□ 0.78
TRIM47-201ENST00000254816 PQBP1O60828 265 aaKnown RBP19.95■□□□□ 0.78
TRIM47-201ENST00000254816 ATP2C2O75185 946 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 SSR1P43307 286 aaKnown RBP19.95■□□□□ 0.78
TRIM47-201ENST00000254816 TOP6BLQ8N6T0 577 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 ACBD3Q9H3P7 528 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 METTL5Q9NRN9 209 aaKnown RBP19.95■□□□□ 0.78
TRIM47-201ENST00000254816 WBP1LQ9NX94 342 aa19.95■□□□□ 0.78
TRIM47-201ENST00000254816 TCF4P15884 667 aa19.94■□□□□ 0.78
TRIM47-201ENST00000254816 SELPP16109 830 aa19.94■□□□□ 0.78
TRIM47-201ENST00000254816 RFC1P35251 1148 aaPredicted RBP19.94■□□□□ 0.78
TRIM47-201ENST00000254816 GJC1P36383 396 aa19.94■□□□□ 0.78
TRIM47-201ENST00000254816 SLC1A1P43005 524 aa19.94■□□□□ 0.78
TRIM47-201ENST00000254816 UPP1Q16831 310 aa19.94■□□□□ 0.78
TRIM47-201ENST00000254816 C8orf74Q6P047 294 aa19.94■□□□□ 0.78
TRIM47-201ENST00000254816 PMF1Q6P1K2 205 aa19.94■□□□□ 0.78
TRIM47-201ENST00000254816 EMC1Q8N766 993 aa19.94■□□□□ 0.78
TRIM47-201ENST00000254816 RIN2Q8WYP3 895 aaPredicted RBP19.94■□□□□ 0.78
TRIM47-201ENST00000254816 IP6K2Q9UHH9 426 aa19.94■□□□□ 0.78
TRIM47-201ENST00000254816 OGDHLQ9ULD0 1010 aa19.94■□□□□ 0.78
TRIM47-201ENST00000254816 C9IYK1 514 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 E5RJQ4 531 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 F8VP50 259 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 I3L4J1 428 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 NBNO60934 754 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 LMAN1P49257 510 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 RWDD2BP57060 319 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 GPNMBQ14956 572 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 STILQ15468 1287 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 PKDCCQ504Y2 493 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 CRYBG2Q8N1P7 616 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.93■□□□□ 0.78
TRIM47-201ENST00000254816 FAM71BQ8TC56 605 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 HASPINQ8TF76 798 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 AENQ8WTP8 325 aaKnown RBP19.93■□□□□ 0.78
TRIM47-201ENST00000254816 PKNOX2Q96KN3 472 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 DDX47Q9H0S4 455 aaKnown RBP19.93■□□□□ 0.78
TRIM47-201ENST00000254816 VIPAS39Q9H9C1 493 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 TTC7AQ9ULT0 858 aaPredicted RBP19.93■□□□□ 0.78
TRIM47-201ENST00000254816 KRT3P12035 628 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 SKIP12755 728 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 WARSP23381 471 aaKnown RBP19.93■□□□□ 0.78
TRIM47-201ENST00000254816 GABRB2P47870 512 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 SEL1L2Q5TEA6 688 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 DSTYKQ6XUX3 929 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 TSC2P49815 1807 aa19.93■□□□□ 0.78
TRIM47-201ENST00000254816 SYF2O95926 243 aaKnown RBP19.92■□□□□ 0.78
TRIM47-201ENST00000254816 PDE4CQ08493 712 aa19.92■□□□□ 0.78
TRIM47-201ENST00000254816 ARHGAP17Q68EM7 881 aa19.92■□□□□ 0.78
TRIM47-201ENST00000254816 SLC24A5Q71RS6 500 aa19.92■□□□□ 0.78
TRIM47-201ENST00000254816 PIWIL1Q96J94 861 aaKnown RBP19.92■□□□□ 0.78
TRIM47-201ENST00000254816 STIM2Q9P246 746 aa19.92■□□□□ 0.78
TRIM47-201ENST00000254816 HESX1Q9UBX0 185 aa19.92■□□□□ 0.78
TRIM47-201ENST00000254816 SIGLEC16A6NMB1 481 aa19.92■□□□□ 0.78
TRIM47-201ENST00000254816 GRIK3Q13003 919 aa19.92■□□□□ 0.78
TRIM47-201ENST00000254816 ZNF268Q14587 947 aaPredicted RBP19.92■□□□□ 0.78
TRIM47-201ENST00000254816 FAM183BPQ6ZVS7 135 aa19.92■□□□□ 0.78
TRIM47-201ENST00000254816 SND1Q7KZF4 910 aaKnown RBP eCLIP19.92■□□□□ 0.78
TRIM47-201ENST00000254816 SLC2A14Q8TDB8 520 aa19.92■□□□□ 0.78
TRIM47-201ENST00000254816 IPO4Q8TEX9 1081 aaKnown RBP19.92■□□□□ 0.78
TRIM47-201ENST00000254816 EXOC4Q96A65 974 aa19.92■□□□□ 0.78
TRIM47-201ENST00000254816 UBN1Q9NPG3 1134 aa19.92■□□□□ 0.78
TRIM47-201ENST00000254816 TCRBV7S2A1N4TA0A589 114 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms