RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 USP17L13C9JLJ4 530 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 USP17L11C9JVI0 530 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 USP17L18D6R9N7 530 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 USP17L22D6RA61 530 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 USP17L17D6RBQ6 530 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 USP17L19D6RCP7 530 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 USP17L20D6RJB6 530 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 LPXNO60711 386 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 USP1O94782 785 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 PROSCO94903 275 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 CDK4P11802 303 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 CIITAP33076 1130 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 GPX6P59796 221 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 USP17L24Q0WX57 530 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 HIC1Q14526 733 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 CIAPIN1Q6FI81 312 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 USP17L6PQ6QN14 398 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 TREML1Q86YW5 311 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 ALLCQ8N6M5 410 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 DDX1Q92499 740 aaKnown RBP21.4■■□□□ 1.02
RARA-201ENST00000254066 APOPT1Q96IL0 206 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 UIMC1Q96RL1 719 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 PAFAH2Q99487 392 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 HEMGNQ9BXL5 484 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 RBM38Q9H0Z9 239 aaKnown RBP21.4■■□□□ 1.02
RARA-201ENST00000254066 BTBD7Q9P203 1132 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 ARMCX1Q9P291 453 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 DENRO43583 198 aaKnown RBP21.4■■□□□ 1.02
RARA-201ENST00000254066 GRIN3BO60391 1043 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 OR6B1O95007 311 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 HNRNPCP07910 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
RARA-201ENST00000254066 SLC18A2Q05940 514 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 CBX3Q13185 183 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 RBM44Q6ZP01 1051 aaKnown RBP21.4■■□□□ 1.02
RARA-201ENST00000254066 MAP7D3Q8IWC1 876 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 LRRC47Q8N1G4 583 aaKnown RBP21.4■■□□□ 1.02
RARA-201ENST00000254066 KREMEN1Q96MU8 473 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 SETDB2Q96T68 719 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 MRPS26Q9BYN8 205 aaKnown RBP21.4■■□□□ 1.02
RARA-201ENST00000254066 SOX13Q9UN79 622 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 PPME1Q9Y570 386 aa21.4■■□□□ 1.02
RARA-201ENST00000254066 BIRC5O15392 142 aa21.39■■□□□ 1.02
RARA-201ENST00000254066 CCNT2O60583 730 aaKnown RBP21.39■■□□□ 1.02
RARA-201ENST00000254066 CLPTM1O96005 669 aa21.39■■□□□ 1.02
RARA-201ENST00000254066 CRKLP46109 303 aaKnown RBP21.39■■□□□ 1.02
RARA-201ENST00000254066 CPA2P48052 419 aa21.39■■□□□ 1.02
RARA-201ENST00000254066 PHEXP78562 749 aa21.39■■□□□ 1.02
RARA-201ENST00000254066 KLHDC10Q6PID8 442 aa21.39■■□□□ 1.02
RARA-201ENST00000254066 NUP93Q8N1F7 819 aa21.39■■□□□ 1.02
RARA-201ENST00000254066 GAB3Q8WWW8 586 aa21.39■■□□□ 1.02
RARA-201ENST00000254066 CCDC106Q9BWC9 280 aa21.39■■□□□ 1.02
RARA-201ENST00000254066 FOSP01100 380 aaPredicted RBP21.39■■□□□ 1.01
RARA-201ENST00000254066 TFAP2AP05549 437 aa21.39■■□□□ 1.01
RARA-201ENST00000254066 ARSEP51690 589 aa21.39■■□□□ 1.01
RARA-201ENST00000254066 DLG4P78352 724 aa21.39■■□□□ 1.01
RARA-201ENST00000254066 CYP4A11Q02928 519 aa21.39■■□□□ 1.01
RARA-201ENST00000254066 MCOLN2Q8IZK6 566 aa21.39■■□□□ 1.01
RARA-201ENST00000254066 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.39■■□□□ 1.01
RARA-201ENST00000254066 DCAKDQ8WVC6 231 aa21.39■■□□□ 1.01
RARA-201ENST00000254066 HSD17B14Q9BPX1 270 aa21.39■■□□□ 1.01
RARA-201ENST00000254066 Q9H521 79 aa21.39■■□□□ 1.01
RARA-201ENST00000254066 TELO2Q9Y4R8 837 aa21.39■■□□□ 1.01
RARA-201ENST00000254066 IQANK1A0A1B0GTG1 560 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 MT-ND3P03897 115 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 EMP3P54852 163 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 GPSM2P81274 684 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 ALCAMQ13740 583 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 ALYREFQ86V81 257 aaKnown RBP21.38■■□□□ 1.01
RARA-201ENST00000254066 SMYD1Q8NB12 490 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 ICA1LQ8NDH6 482 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 NLGN2Q8NFZ4 835 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 DDI1Q8WTU0 396 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 KAT5Q92993 513 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 CLUHO75153 1309 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 A0A088AWK7 358 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 C15orf38-AP3S2A0A0A6YYH1 394 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 FAM237BA0A1B0GVD1 139 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 USP17L10C9JJH3 530 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 FAM155BO75949 473 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 BMP3P12645 472 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 BTDP43251 543 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 CD97P48960 835 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 MXI1P50539 228 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 AQP4P55087 323 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 GPS1Q13098 491 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 HIF1AQ16665 826 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 ARPINQ7Z6K5 226 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 CROCCP3Q8IVE0 287 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 GDPD5Q8WTR4 605 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 TMEM206Q9H813 350 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 PPARGC1AQ9UBK2 798 aaKnown RBP21.38■■□□□ 1.01
RARA-201ENST00000254066 ITGB1BP2Q9UKP3 347 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 SUGT1Q9Y2Z0 365 aa21.38■■□□□ 1.01
RARA-201ENST00000254066 GCLMP48507 274 aa21.37■■□□□ 1.01
RARA-201ENST00000254066 PLCB3Q01970 1234 aa21.37■■□□□ 1.01
RARA-201ENST00000254066 DLG1Q12959 904 aa21.37■■□□□ 1.01
RARA-201ENST00000254066 RDH13Q8NBN7 331 aa21.37■■□□□ 1.01
RARA-201ENST00000254066 FBXO27Q8NI29 283 aa21.37■■□□□ 1.01
RARA-201ENST00000254066 PYROXD1Q8WU10 500 aa21.37■■□□□ 1.01
RARA-201ENST00000254066 CLPTM1LQ96KA5 538 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms