RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 VSTM1Q6UX27 236 aa26.76■■□□□ 1.87
LSM7-201ENST00000252622 BMP8AQ7Z5Y6 402 aa26.76■■□□□ 1.87
LSM7-201ENST00000252622 B3GALNT2Q8NCR0 500 aa26.76■■□□□ 1.87
LSM7-201ENST00000252622 FBXL13Q8NEE6 735 aa26.76■■□□□ 1.87
LSM7-201ENST00000252622 SLC35C1Q96A29 364 aa26.76■■□□□ 1.87
LSM7-201ENST00000252622 BCO2Q9BYV7 579 aa26.76■■□□□ 1.87
LSM7-201ENST00000252622 GPR88Q9GZN0 384 aa26.76■■□□□ 1.87
LSM7-201ENST00000252622 NIF3L1Q9GZT8 377 aa26.76■■□□□ 1.87
LSM7-201ENST00000252622 APOBEC3GQ9HC16 384 aaKnown RBP26.76■■□□□ 1.87
LSM7-201ENST00000252622 A0A1W2PRU2 124 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 CSH1P0DML2 217 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 CSH2P0DML3 217 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 TEAD2Q15562 447 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 TAF12Q16514 161 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 GAREM2Q75VX8 874 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 FAXDC2Q96IV6 333 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 TNIP3Q96KP6 325 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 CEP295NLQ96MC4 621 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 CYP3A43Q9HB55 503 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 IL21Q9HBE4 155 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 TRIOO75962 3097 aa26.75■■□□□ 1.87
LSM7-201ENST00000252622 ECI2O75521 394 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 SRFP11831 508 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 HMGA1P17096 107 aaKnown RBP26.74■■□□□ 1.87
LSM7-201ENST00000252622 GJA1P17302 382 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 GABRR2P28476 465 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 CDC25CP30307 473 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 STX17P56962 302 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 CYP27A1Q02318 531 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 DDR2Q16832 855 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 CCDC40Q4G0X9 1142 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 CBWD6Q4V339 395 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 CBWD3Q5JTY5 395 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 CBWD5Q5RIA9 395 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 UNC93AQ86WB7 457 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 MLKLQ8NB16 471 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 GPR152Q8TDT2 470 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 SEMA4DQ92854 862 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 ASB16Q96NS5 453 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 RAB20Q9NX57 234 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 RWDD2AQ9UIY3 292 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 COQ4Q9Y3A0 265 aa26.74■■□□□ 1.87
LSM7-201ENST00000252622 NARSO43776 548 aaKnown RBP26.73■■□□□ 1.87
LSM7-201ENST00000252622 NOL4O94818 638 aa26.73■■□□□ 1.87
LSM7-201ENST00000252622 GNA14O95837 355 aa26.73■■□□□ 1.87
LSM7-201ENST00000252622 BDNFP23560 247 aa26.73■■□□□ 1.87
LSM7-201ENST00000252622 INCA1Q0VD86 236 aa26.73■■□□□ 1.87
LSM7-201ENST00000252622 FAM78AQ5JUQ0 283 aa26.73■■□□□ 1.87
LSM7-201ENST00000252622 GCNAQ96QF7 691 aa26.73■■□□□ 1.87
LSM7-201ENST00000252622 RPP25Q9BUL9 199 aaKnown RBP26.73■■□□□ 1.87
LSM7-201ENST00000252622 ELOVL4Q9GZR5 314 aa26.73■■□□□ 1.87
LSM7-201ENST00000252622 ATXN3LQ9H3M9 355 aa26.73■■□□□ 1.87
LSM7-201ENST00000252622 FCARP24071 287 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 SDHAF4Q5VUM1 108 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 HFE2Q6ZVN8 426 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 SCN4BQ8IWT1 228 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 ST13P5Q8NFI4 369 aaPredicted RBP26.72■■□□□ 1.87
LSM7-201ENST00000252622 SMARCD2Q92925 531 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 ELSPBP1Q96BH3 223 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 TRMT2BQ96GJ1 504 aaKnown RBP26.72■■□□□ 1.87
LSM7-201ENST00000252622 SPATA17Q96L03 361 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 MYRFLQ96LU7 910 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 ZSWIM3Q96MP5 696 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 KXD1Q9BQD3 176 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 TRPV4Q9HBA0 871 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.72■■□□□ 1.873e-9■■■■□ 24
LSM7-201ENST00000252622 SLC2A4RGQ9NR83 387 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 PTPRDP23468 1912 aa26.72■■□□□ 1.87
LSM7-201ENST00000252622 SLC38A8A6NNN8 435 aa26.71■■□□□ 1.87
LSM7-201ENST00000252622 TRIM66O15016 1216 aa26.71■■□□□ 1.87
LSM7-201ENST00000252622 PMM2O15305 246 aa26.71■■□□□ 1.87
LSM7-201ENST00000252622 LRRN2O75325 713 aa26.71■■□□□ 1.87
LSM7-201ENST00000252622 FGFR1OPO95684 399 aaKnown RBP26.71■■□□□ 1.87
LSM7-201ENST00000252622 NDST1P52848 882 aa26.71■■□□□ 1.87
LSM7-201ENST00000252622 MARSP56192 900 aaKnown RBP26.71■■□□□ 1.87
LSM7-201ENST00000252622 ARHGAP15Q53QZ3 475 aa26.71■■□□□ 1.87
LSM7-201ENST00000252622 CRYBG2Q8N1P7 616 aa26.71■■□□□ 1.87
LSM7-201ENST00000252622 GPT2Q8TD30 523 aa26.71■■□□□ 1.87
LSM7-201ENST00000252622 B3GNT5Q9BYG0 378 aa26.71■■□□□ 1.87
LSM7-201ENST00000252622 SLITRK6Q9H5Y7 841 aa26.71■■□□□ 1.87
LSM7-201ENST00000252622 UXTQ9UBK9 157 aaPredicted RBP26.71■■□□□ 1.87
LSM7-201ENST00000252622 ZMYM5Q9UJ78 669 aa26.71■■□□□ 1.87
LSM7-201ENST00000252622 ATP8B3O60423 1300 aa26.7■■□□□ 1.87
LSM7-201ENST00000252622 GRIK1P39086 918 aa26.7■■□□□ 1.86
LSM7-201ENST00000252622 WDR44Q5JSH3 913 aa26.7■■□□□ 1.86
LSM7-201ENST00000252622 TANGO2Q6ICL3 276 aa26.7■■□□□ 1.86
LSM7-201ENST00000252622 ZSCAN18Q8TBC5 510 aaPredicted RBP26.7■■□□□ 1.86
LSM7-201ENST00000252622 PBXIP1Q96AQ6 731 aa26.7■■□□□ 1.86
LSM7-201ENST00000252622 C8orf48Q96LL4 319 aa26.7■■□□□ 1.86
LSM7-201ENST00000252622 SRRTQ9BXP5 876 aaKnown RBP26.7■■□□□ 1.86
LSM7-201ENST00000252622 ZNF518BQ9C0D4 1074 aa26.7■■□□□ 1.86
LSM7-201ENST00000252622 FAM124BQ9H5Z6 455 aaPredicted RBP26.7■■□□□ 1.86
LSM7-201ENST00000252622 ZFP14Q9HCL3 533 aa26.7■■□□□ 1.86
LSM7-201ENST00000252622 WNT16Q9UBV4 365 aa26.7■■□□□ 1.86
LSM7-201ENST00000252622 HMGXB4Q9UGU5 601 aa26.7■■□□□ 1.86
LSM7-201ENST00000252622 ANXA13P27216 316 aa26.69■■□□□ 1.86
LSM7-201ENST00000252622 FMO5P49326 533 aa26.69■■□□□ 1.86
LSM7-201ENST00000252622 NLRP12P59046 1061 aa26.69■■□□□ 1.86
LSM7-201ENST00000252622 STXBP5Q5T5C0 1151 aa26.69■■□□□ 1.86
LSM7-201ENST00000252622 TMEM150AQ86TG1 271 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms