RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 PTPN22Q9Y2R2 807 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCCB-201ENST00000251654 MKI67P46013 3256 aaKnown RBP18.23■□□□□ 0.51
PCCB-201ENST00000251654 ZSCAN5CA6NGD5 496 aaPredicted RBP18.23■□□□□ 0.51
PCCB-201ENST00000251654 E5RJQ4 531 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 F8VP50 259 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 PODXLO00592 558 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 CYB561D2O14569 222 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 HEXIM1O94992 359 aaKnown RBP18.23■□□□□ 0.51
PCCB-201ENST00000251654 SKIP12755 728 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 TCF4P15884 667 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 UPP1Q16831 310 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 CCNI2Q6ZMN8 369 aaPredicted RBP18.23■□□□□ 0.51
PCCB-201ENST00000251654 RTN4RL1Q86UN2 441 aaPredicted RBP18.23■□□□□ 0.51
PCCB-201ENST00000251654 SLC13A5Q86YT5 568 aaPredicted RBP18.23■□□□□ 0.51
PCCB-201ENST00000251654 FAM126BQ8IXS8 530 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 LINC01599Q8WXQ3 324 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 SNX25Q9H3E2 840 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 SLITRK6Q9H5Y7 841 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 ST7Q9NRC1 585 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 RGS18Q9NS28 235 aa18.23■□□□□ 0.51
PCCB-201ENST00000251654 TCRBV7S2A1N4TA0A589 114 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 CASTOR2A6NHX0 329 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 GABRDO14764 452 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 SETSIPP0DME0 302 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 CCDC130P13994 396 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 HSPA6P17066 643 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 TNFRSF8P28908 595 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 RPL9P32969 192 aaKnown RBP18.22■□□□□ 0.51
PCCB-201ENST00000251654 AARSP49588 968 aaKnown RBP eCLIP18.22■□□□□ 0.51
PCCB-201ENST00000251654 PIGHQ14442 188 aaPredicted RBP18.22■□□□□ 0.51
PCCB-201ENST00000251654 MTFR1Q15390 333 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 WSCD1Q658N2 575 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 PMF1Q6P1K2 205 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 KATNAL2Q8IYT4 538 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 IPO4Q8TEX9 1081 aaKnown RBP18.22■□□□□ 0.51
PCCB-201ENST00000251654 PGBD4Q96DM1 585 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 FUT8Q9BYC5 575 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 GDF3Q9NR23 364 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 METTL5Q9NRN9 209 aaKnown RBP18.22■□□□□ 0.51
PCCB-201ENST00000251654 AMACRQ9UHK6 382 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 USTQ9Y2C2 406 aa18.22■□□□□ 0.51
PCCB-201ENST00000251654 GOLGA6L10A0A0M3HER8 536 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 C9IYK1 514 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 INPPL1O15357 1258 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 POMCP01189 267 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 FAM163BP0C2L3 166 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 PDE4CQ08493 712 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 SIX1Q15475 284 aaPredicted RBP18.21■□□□□ 0.51
PCCB-201ENST00000251654 GSPT2Q8IYD1 628 aaKnown RBP18.21■□□□□ 0.51
PCCB-201ENST00000251654 PRELID2Q8N945 189 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 B3GALNT2Q8NCR0 500 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 STK32AQ8WU08 396 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 PIWIL1Q96J94 861 aaKnown RBP18.21■□□□□ 0.51
PCCB-201ENST00000251654 TNIP3Q96KP6 325 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 SENP8Q96LD8 212 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 DEFB118Q96PH6 123 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 PLVAPQ9BX97 442 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 SLC4A5Q9BY07 1137 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 SEZ6LQ9BYH1 1024 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 PLEKHA4Q9H4M7 779 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 UBN1Q9NPG3 1134 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 HESX1Q9UBX0 185 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 GABBR2O75899 941 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 SASH3O75995 380 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 MYCP01106 439 aaPredicted RBP18.21■□□□□ 0.51
PCCB-201ENST00000251654 GRIK3Q13003 919 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 LRRC38Q5VT99 294 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 LRRC8DQ7L1W4 858 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 TMEM110Q86TL2 294 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 EMC1Q8N766 993 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 ANKRD52Q8NB46 1076 aa18.21■□□□□ 0.51
PCCB-201ENST00000251654 ESYT3A0FGR9 886 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 BHMG1C9JSJ3 638 aaPredicted RBP18.2■□□□□ 0.5
PCCB-201ENST00000251654 PIK3R2O00459 728 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 FSCN2O14926 492 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
PCCB-201ENST00000251654 RGS7P49802 495 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 PPP2R5EQ16537 467 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 CCDC142Q17RM4 750 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 FAM102AQ5T9C2 384 aaPredicted RBP18.2■□□□□ 0.5
PCCB-201ENST00000251654 FAM183BPQ6ZVS7 135 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 SLC24A5Q71RS6 500 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 ARFGAP1Q8N6T3 406 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 SLC2A14Q8TDB8 520 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 HERPUD2Q9BSE4 406 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 BEGAINQ9BUH8 593 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 MIS12Q9H081 205 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 OGDHLQ9ULD0 1010 aa18.2■□□□□ 0.5
PCCB-201ENST00000251654 ATP8B1O43520 1251 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 ATP2C2O75185 946 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 LRCH4O75427 683 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 SELPP16109 830 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 TKTP29401 623 aaKnown RBP18.19■□□□□ 0.5
PCCB-201ENST00000251654 BCAT1P54687 386 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 GUCY2DQ02846 1103 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 BST2Q10589 180 aaKnown RBP18.19■□□□□ 0.5
PCCB-201ENST00000251654 GPNMBQ14956 572 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 CYP1B1Q16678 543 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 OLFML1Q6UWY5 402 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms