RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MICAL2O94851 1124 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 TJP3O95049 919 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 TTC4O95801 387 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 PRAMEF19Q5SWL8 479 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 MAMDC4Q6UXC1 1216 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 OTUD6BQ8N6M0 293 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 RBM15Q96T37 977 aaKnown RBP eCLIP16.6■□□□□ 0.258e-6■■■■□ 19.3
LRFN1-201ENST00000248668 SAYSD1Q9NPB0 183 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 CETPP11597 493 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 YWHAEP62258 255 aaKnown RBP16.6■□□□□ 0.25
LRFN1-201ENST00000248668 TMEM132DQ14C87 1099 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 PPP1R15BQ5SWA1 713 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 ILDR2Q71H61 639 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 TRMT10CQ7L0Y3 403 aaKnown RBP16.6■□□□□ 0.25
LRFN1-201ENST00000248668 EXOC3L1Q86VI1 746 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 ARHGEF2Q92974 986 aaKnown RBP16.6■□□□□ 0.25
LRFN1-201ENST00000248668 PIWIL1Q96J94 861 aaKnown RBP16.6■□□□□ 0.25
LRFN1-201ENST00000248668 NEU2Q9Y3R4 380 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 PPME1Q9Y570 386 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 hCG_1818297A0A087WSY0 165 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 LRCH4O75427 683 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 CYP4X1Q8N118 509 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 KIF12Q96FN5 646 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 C16orf70Q9BSU1 422 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 PPEF2O14830 753 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 ASAP2O43150 1006 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 IL18RAPO95256 599 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 SNAI1O95863 264 aaPredicted RBP16.59■□□□□ 0.25
LRFN1-201ENST00000248668 AGTP01019 485 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 MMP13P45452 471 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 GAD2Q05329 585 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 PIGHQ14442 188 aaPredicted RBP16.59■□□□□ 0.25
LRFN1-201ENST00000248668 ZNF792Q3KQV3 632 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 TFDP3Q5H9I0 405 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 ZNF484Q5JVG2 852 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 FAM102AQ5T9C2 384 aaPredicted RBP16.59■□□□□ 0.25
LRFN1-201ENST00000248668 MTHFD1LQ6UB35 978 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 LPIN3Q9BQK8 851 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 PCDHGC3Q9UN70 934 aa16.59■□□□□ 0.25
LRFN1-201ENST00000248668 CST8O60676 142 aa16.58■□□□□ 0.25
LRFN1-201ENST00000248668 VIMP08670 466 aaKnown RBP16.58■□□□□ 0.25
LRFN1-201ENST00000248668 KLRC2P26717 231 aa16.58■□□□□ 0.25
LRFN1-201ENST00000248668 CDKN2BP42772 138 aa16.58■□□□□ 0.25
LRFN1-201ENST00000248668 NDST1P52848 882 aa16.58■□□□□ 0.25
LRFN1-201ENST00000248668 DYDC1Q8WWB3 177 aa16.58■□□□□ 0.25
LRFN1-201ENST00000248668 TMEM176AQ96HP8 235 aa16.58■□□□□ 0.25
LRFN1-201ENST00000248668 CALN1Q9BXU9 219 aa16.58■□□□□ 0.25
LRFN1-201ENST00000248668 HOMER3Q9NSC5 361 aa16.58■□□□□ 0.25
LRFN1-201ENST00000248668 FAM49BQ9NUQ9 324 aa16.58■□□□□ 0.25
LRFN1-201ENST00000248668 PNMA3Q9UL41 463 aa16.58■□□□□ 0.25
LRFN1-201ENST00000248668 SMPD1P17405 629 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 CCNA1P78396 465 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 XYLT1Q86Y38 959 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 GDAP1Q8TB36 358 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 CNOT10Q9H9A5 744 aaKnown RBP16.58■□□□□ 0.24
LRFN1-201ENST00000248668 ADCY6O43306 1168 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 HCRTO43612 131 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 MAP3K6O95382 1288 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 GDF10P55107 478 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 GRIK4Q16099 956 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 ERMARDQ5T6L9 678 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 SYDE1Q6ZW31 735 aaPredicted RBP16.58■□□□□ 0.24
LRFN1-201ENST00000248668 ACTL9Q8TC94 416 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 LRRN4Q8WUT4 740 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 SGSM3Q96HU1 749 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 BCO2Q9BYV7 579 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 ZNF518BQ9C0D4 1074 aa16.58■□□□□ 0.24
LRFN1-201ENST00000248668 MED7O43513 233 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 TSPAN1O60635 241 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 CILPO75339 1184 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 NPTXRO95502 500 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 PECAM1P16284 738 aaPredicted RBP16.57■□□□□ 0.24
LRFN1-201ENST00000248668 OTUD4Q01804 1114 aaKnown RBP16.57■□□□□ 0.24
LRFN1-201ENST00000248668 C15orf59Q2T9L4 293 aaPredicted RBP16.57■□□□□ 0.24
LRFN1-201ENST00000248668 SRRM1Q8IYB3 904 aaKnown RBP16.57■□□□□ 0.24
LRFN1-201ENST00000248668 PPTC7Q8NI37 304 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 BRI3BPQ8WY22 251 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 SEC16BQ96JE7 1060 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 CABS1Q96KC9 395 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 ACAP3Q96P50 834 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 FAM129AQ9BZQ8 928 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 CDHR5Q9HBB8 845 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 DPP3Q9NY33 737 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 CCDC189A1A4V9 331 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 MCF2P10911 925 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 ATP11AP98196 1134 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 MMRN1Q13201 1228 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 LDLRAD1Q5T700 205 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 OR6B2Q6IFH4 312 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 ANKMY2Q8IV38 441 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 LRRC34Q8IZ02 419 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 ATXN2LQ8WWM7 1075 aaKnown RBP16.57■□□□□ 0.24
LRFN1-201ENST00000248668 CHMP6Q96FZ7 201 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 SNTG2Q9NY99 539 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 STRIP2Q9ULQ0 834 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 TMEM120BA0PK00 339 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 SIGLEC16A6NMB1 481 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 POC1B-GALNT4F8VUJ3 575 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 CYP3A5P20815 502 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 CDH5P33151 784 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms