RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 RIPK1Q13546 671 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 PKN2Q16513 984 aaKnown RBP22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 HP1BP3Q5SSJ5 553 aaPredicted RBP22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 ATF7IP2Q5U623 682 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 TLDC1Q6P9B6 456 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 BBS12Q6ZW61 710 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 EEPD1Q7L9B9 569 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 TRIM50Q86XT4 487 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 THNSL1Q8IYQ7 743 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 TTC13Q8NBP0 860 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 FZD8Q9H461 694 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 RGS17Q9UGC6 210 aaPredicted RBP22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 AGTPBP1Q9UPW5 1226 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 A0A1B0GUA9 196 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 SPAG7O75391 227 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 NQO1P15559 274 aaKnown RBP22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 IL1R2P27930 398 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 OTUD4Q01804 1114 aaKnown RBP22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 VGLL4Q14135 290 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 HADHQ16836 314 aaKnown RBP22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 FITM2Q8N6M3 262 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 ACTL9Q8TC94 416 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 RMDN2Q96LZ7 410 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 BCO2Q9BYV7 579 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 KLHL14Q9P2G3 628 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 TJP2Q9UDY2 1190 aa22.74■■□□□ 1.23
SH2D3A-201ENST00000245908 CD19P15391 556 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 RGS9BPQ6ZS82 235 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 PLPPR4Q7Z2D5 763 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 CEP57Q86XR8 500 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 RHPN2Q8IUC4 686 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 CEP120Q8N960 986 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 PITPNM3Q9BZ71 974 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 ZWILCHQ9H900 591 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 NXF1Q9UBU9 619 aaKnown RBP22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 KDELR1P24390 212 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 PSMC1P62191 440 aaKnown RBP22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 MGAT5Q09328 741 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 HIF1AQ16665 826 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 HSDL1Q3SXM5 330 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 EFHC2Q5JST6 749 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 PPIL6Q8IXY8 311 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 SMC6Q96SB8 1091 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 NOD2Q9HC29 1040 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 GPRC5DQ9NZD1 345 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 WDR35Q9P2L0 1181 aa22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 PSMC3IPQ9P2W1 217 aaPredicted RBP22.73■■□□□ 1.23
SH2D3A-201ENST00000245908 CST8O60676 142 aa22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 KRT15P19012 456 aa22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 RAP1GAPP47736 663 aa22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 CTCFP49711 727 aaPredicted RBP22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 CCDC15Q0P6D6 951 aa22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 SPARCL1Q14515 664 aa22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 ZNF268Q14587 947 aaPredicted RBP22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 SMTNL2Q2TAL5 461 aa22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 EEF1DP3Q658K8 133 aa22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 KIAA0319LQ8IZA0 1049 aa22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 KIF9Q9HAQ2 790 aa22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 FETUBQ9UGM5 382 aa22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 STARD13Q9Y3M8 1113 aa22.72■■□□□ 1.23
SH2D3A-201ENST00000245908 CLUHO75153 1309 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 B4GALT5O43286 388 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 IL18RAPO95256 599 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 ITGBL1O95965 494 aaPredicted RBP22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 HIRAP54198 1017 aaPredicted RBP22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 RAD23BP54727 409 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 GPX6P59796 221 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 OSTNP61366 133 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 DYNLT1P63172 113 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 TFDP1Q14186 410 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 CELF3Q5SZQ8 465 aaKnown RBP22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 CAPN12Q6ZSI9 719 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 XYLT1Q86Y38 959 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 CPT1BQ92523 772 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 PAIP2Q9BPZ3 127 aaKnown RBP22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 SAE1Q9UBE0 346 aaPredicted RBP22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 SIX4Q9UIU6 781 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 PNMA3Q9UL41 463 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 SOCS7O14512 581 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 PSMC4P43686 418 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 GDF10P55107 478 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 KCNJ2P63252 427 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 ZNF667Q5HYK9 610 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 ECHDC2Q86YB7 292 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 NAT8LQ8N9F0 302 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 CPXM1Q96SM3 734 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 CDT1Q9H211 546 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 PPP1R1BQ9UD71 204 aaPredicted RBP22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 PAPPA2Q9BXP8 1791 aa22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 POLR2AP24928 1970 aaKnown RBP22.71■■□□□ 1.23
SH2D3A-201ENST00000245908 NOP56O00567 594 aaKnown RBP22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 ARL4CP56559 192 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 KCNT1Q5JUK3 1230 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 FAM47EQ6ZV65 393 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 SDCBP2Q9H190 292 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 METTL5Q9NRN9 209 aaKnown RBP22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 BAIAP2L1Q9UHR4 511 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 GOLGA8MH3BSY2 632 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 INO80B-WBP1J3KQ70 363 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 IGF2BP3O00425 579 aaKnown RBP eCLIP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms