RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 NCAPGQ9BPX3 1015 aa23.07■■□□□ 1.28
RNF39-201ENST00000244360 ELAC2Q9BQ52 826 aaKnown RBP23.07■■□□□ 1.28
RNF39-201ENST00000244360 ELOVL4Q9GZR5 314 aa23.07■■□□□ 1.28
RNF39-201ENST00000244360 PLXNA1Q9UIW2 1896 aa23.07■■□□□ 1.28
RNF39-201ENST00000244360 CFAP73A6NFT4 308 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 KRT3P12035 628 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 ADORA2AP29274 412 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 VCPP55072 806 aaKnown RBP23.06■■□□□ 1.28
RNF39-201ENST00000244360 PTPN11Q06124 597 aaPredicted RBP23.06■■□□□ 1.28
RNF39-201ENST00000244360 P3H1Q32P28 736 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 SLC10A6Q3KNW5 377 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 ZNF467Q7Z7K2 595 aaPredicted RBP23.06■■□□□ 1.28
RNF39-201ENST00000244360 XYLT1Q86Y38 959 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 PWWP2AQ96N64 755 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 CPXM1Q96SM3 734 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 C16orf70Q9BSU1 422 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 TJP2Q9UDY2 1190 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 LRRD1A4D1F6 860 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 DNALI1O14645 258 aaPredicted RBP23.06■■□□□ 1.28
RNF39-201ENST00000244360 ATP2C2O75185 946 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 ITGBL1O95965 494 aaPredicted RBP23.06■■□□□ 1.28
RNF39-201ENST00000244360 ARF4P18085 180 aaPredicted RBP23.06■■□□□ 1.28
RNF39-201ENST00000244360 PSMA2P25787 234 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 TAZQ16635 292 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 ZFYVE27Q5T4F4 411 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 ARFGAP1Q8N6T3 406 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 JOSD2Q8TAC2 188 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 AFG1LQ8WV93 481 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 PLCD4Q9BRC7 762 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 DNAJC17Q9NVM6 304 aaKnown RBP23.06■■□□□ 1.28
RNF39-201ENST00000244360 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.06■■□□□ 1.28
RNF39-201ENST00000244360 HMGXB4Q9UGU5 601 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 PLXNB2O15031 1838 aa23.06■■□□□ 1.28
RNF39-201ENST00000244360 GOLGA8SH3BPF8 625 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 MGRN1O60291 552 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 SNX3O60493 162 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 LRCH4O75427 683 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 CSDE1O75534 798 aaKnown RBP23.05■■□□□ 1.28
RNF39-201ENST00000244360 OAS1P00973 400 aaKnown RBP23.05■■□□□ 1.28
RNF39-201ENST00000244360 ITGAVP06756 1048 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 GABRB2P47870 512 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 PSMC1P62191 440 aaKnown RBP23.05■■□□□ 1.28
RNF39-201ENST00000244360 ZNF268Q14587 947 aaPredicted RBP23.05■■□□□ 1.28
RNF39-201ENST00000244360 PRUNE1Q86TP1 453 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 TMEM130Q8N3G9 435 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 GLIS1Q8NBF1 620 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 TMEM176AQ96HP8 235 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 FAM124BQ9H5Z6 455 aaPredicted RBP23.05■■□□□ 1.28
RNF39-201ENST00000244360 CD248Q9HCU0 757 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 LGALS13Q9UHV8 139 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.05■■□□□ 1.28
RNF39-201ENST00000244360 ZNF148Q9UQR1 794 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 AKT3Q9Y243 479 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 STAU1O95793 577 aaKnown RBP23.05■■□□□ 1.28
RNF39-201ENST00000244360 KRT7P08729 469 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 ABHD2P08910 425 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 YBX3P16989 372 aaKnown RBP eCLIP23.05■■□□□ 1.28
RNF39-201ENST00000244360 SLC8A1P32418 973 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 IFNAR2P48551 515 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 PREPLQ4J6C6 727 aaPredicted RBP23.05■■□□□ 1.28
RNF39-201ENST00000244360 DPY19L2Q6NUT2 758 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 MTHFD1LQ6UB35 978 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 GBP7Q8N8V2 638 aaPredicted RBP23.05■■□□□ 1.28
RNF39-201ENST00000244360 SLC35B2Q8TB61 432 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 ACSF2Q96CM8 615 aaPredicted RBP23.05■■□□□ 1.28
RNF39-201ENST00000244360 CPB2Q96IY4 423 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 SLC45A1Q9Y2W3 748 aa23.05■■□□□ 1.28
RNF39-201ENST00000244360 TMEM120BA0PK00 339 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 VTNP04004 478 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 ERBB2P04626 1255 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 ZNF286BP0CG31 522 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 P4HA1P13674 534 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 MKRN3Q13064 507 aaKnown RBP23.04■■□□□ 1.28
RNF39-201ENST00000244360 CCDC38Q502W7 563 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 ILDR2Q71H61 639 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 MCRS1Q96EZ8 462 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.04■■□□□ 1.28
RNF39-201ENST00000244360 C2CD2Q9Y426 696 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 USP15Q9Y4E8 981 aaPredicted RBP23.04■■□□□ 1.28
RNF39-201ENST00000244360 MICAL2O94851 1124 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 INCA1Q0VD86 236 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 TMEM132DQ14C87 1099 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 CCDC142Q17RM4 750 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 WLSQ5T9L3 541 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 KIAA0319LQ8IZA0 1049 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 SLC10A4Q96EP9 437 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 FRMD8P1Q9BZ68 369 aaPredicted RBP23.04■■□□□ 1.28
RNF39-201ENST00000244360 ITGA11Q9UKX5 1188 aa23.04■■□□□ 1.28
RNF39-201ENST00000244360 TSPAN1O60635 241 aa23.03■■□□□ 1.28
RNF39-201ENST00000244360 HMGCRP04035 888 aa23.03■■□□□ 1.28
RNF39-201ENST00000244360 HOXD8P13378 290 aaPredicted RBP23.03■■□□□ 1.28
RNF39-201ENST00000244360 IL1R2P27930 398 aa23.03■■□□□ 1.28
RNF39-201ENST00000244360 CCDC63Q8NA47 563 aa23.03■■□□□ 1.28
RNF39-201ENST00000244360 CCDC77Q9BR77 488 aa23.03■■□□□ 1.28
RNF39-201ENST00000244360 PCDH9Q9HC56 1237 aa23.03■■□□□ 1.28
RNF39-201ENST00000244360 GEMIN8Q9NWZ8 242 aaKnown RBP23.03■■□□□ 1.28
RNF39-201ENST00000244360 TPX2Q9ULW0 747 aaKnown RBP23.03■■□□□ 1.28
RNF39-201ENST00000244360 ACTL7BQ9Y614 415 aa23.03■■□□□ 1.28
RNF39-201ENST00000244360 SUN1O94901 812 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 VDRP11473 427 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms