RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 POC1B-GALNT4F8VUJ3 575 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 ENTPD5O75356 428 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 DLDP09622 509 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 NEFHP12036 1026 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 ATP6V1C1P21283 382 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 GNA15P30679 374 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 LIG4P49917 911 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 NEK3P51956 506 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 BPIFB4P59827 614 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 ATP11AP98196 1134 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 FAM91A1Q658Y4 838 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 RSBN1LQ6PCB5 846 aaPredicted RBP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 ABHD15Q6UXT9 468 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 MCF2L2Q86YR7 1114 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 CCDC60Q8IWA6 550 aaPredicted RBP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 ZNF606Q8WXB4 792 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 TMEM121Q9BTD3 319 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 C12orf65Q9H3J6 166 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 DCTN3O75935 186 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 KRT4P19013 534 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 ADRA1DP25100 572 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 PTPN4P29074 926 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 PTDSS1P48651 473 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 NOP14P78316 857 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 KHDC1Q4VXA5 237 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 LVRNQ6Q4G3 990 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 LONP2Q86WA8 852 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 FBF1Q8TES7 1133 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 RNF146Q9NTX7 359 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 PSMC3IPQ9P2W1 217 aaPredicted RBP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 IP6K2Q9UHH9 426 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 ASB3Q9Y575 518 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 PCDHA10Q9Y5I2 948 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 SCINQ9Y6U3 715 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 IL1R2P27930 398 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 GEMIN4P57678 1058 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 GPS1Q13098 491 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 TFDP3Q5H9I0 405 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 FAM83AQ86UY5 434 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 CCDC125Q86Z20 511 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 IGDCC3Q8IVU1 814 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 ZNF526Q8TF50 670 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 FBXO41Q8TF61 875 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 ACSS3Q9H6R3 686 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 SLC17A7Q9P2U7 560 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 WNT10BO00744 389 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 ZWINTO95229 277 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 CST3P01034 146 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 ACADSP16219 412 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 LACTBP83111 547 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 TFDP1Q14186 410 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 PRKD1Q15139 912 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 NLRP9Q7RTR0 991 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 THNSL1Q8IYQ7 743 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 ZBED8Q8IZ13 594 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 RBBP8NLQ8NC74 664 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 TEPSINQ96N21 525 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 CCDC77Q9BR77 488 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 ALG13Q9NP73 1137 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 CYP26B1Q9NR63 512 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 CYTH4Q9UIA0 394 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 A0A0B4J269 797 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 WDR46O15213 610 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 TMEM63AO94886 807 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 MYCNP04198 464 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 GJB1P08034 283 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 CXCL9Q07325 125 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 SMTNL2Q2TAL5 461 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 DSTYKQ6XUX3 929 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 CYP4V2Q6ZWL3 525 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 MTDHQ86UE4 582 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 TRIM50Q86XT4 487 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 KCNV2Q8TDN2 545 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 RBM41Q96IZ5 413 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 ZNF333Q96JL9 665 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 STK32BQ9NY57 414 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 SAE1Q9UBE0 346 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 EFR3BQ9Y2G0 817 aa12.56□□□□□ -0.4
SEC61A1-201ENST00000243253 DGAT1O75907 488 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 TJP3O95049 919 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 SSTR1P30872 391 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 PIK3CAP42336 1068 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 SLC18A2Q05940 514 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 SGSM1Q2NKQ1 1148 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 CEP128Q6ZU80 1094 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 TEX9Q8N6V9 391 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 SPDL1Q96EA4 605 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 VPS11Q9H270 941 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 PCDHB4Q9Y5E5 795 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 KAT6AQ92794 2004 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 DPPA5A6NC42 116 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 ABLIM1O14639 778 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 POLNQ7Z5Q5 900 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 TCP10LQ8TDR4 215 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 SMC6Q96SB8 1091 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 SYT15Q9BQS2 421 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 ARL8BQ9NVJ2 186 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 TGDSO95455 350 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms