RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 MRPS6P82932 125 aaKnown RBP24.53■■□□□ 1.52
MSX2-201ENST00000239243 SNX1Q13596 522 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 UAP1Q16222 522 aaPredicted RBP24.53■■□□□ 1.52
MSX2-201ENST00000239243 TRIB2Q92519 343 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 MRPL45Q9BRJ2 306 aaKnown RBP24.53■■□□□ 1.52
MSX2-201ENST00000239243 WHRNQ9P202 907 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 TJP2Q9UDY2 1190 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 PIRO00625 290 aa24.52■■□□□ 1.52
MSX2-201ENST00000239243 SNX16P57768 344 aa24.52■■□□□ 1.52
MSX2-201ENST00000239243 LMNB2Q03252 620 aa24.52■■□□□ 1.52
MSX2-201ENST00000239243 PTK6Q13882 451 aa24.52■■□□□ 1.52
MSX2-201ENST00000239243 JOSD2Q8TAC2 188 aa24.52■■□□□ 1.52
MSX2-201ENST00000239243 TXLNGYQ9BZA5 131 aa24.52■■□□□ 1.52
MSX2-201ENST00000239243 IPPQ9Y573 584 aa24.52■■□□□ 1.52
MSX2-201ENST00000239243 SCN1AP35498 2009 aa24.52■■□□□ 1.52
MSX2-201ENST00000239243 PPEF2O14830 753 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 RARBP10826 455 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 NKX3-2P78367 333 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 UBA3Q8TBC4 463 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 ATG4AQ8WYN0 398 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 ART4Q93070 314 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 GOLGA7BQ2TAP0 167 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 TFDP3Q5H9I0 405 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 TWF2Q6IBS0 349 aaKnown RBP24.51■■□□□ 1.51
MSX2-201ENST00000239243 SPOCD1Q6ZMY3 1216 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 CCDC114Q96M63 670 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 HESX1Q9UBX0 185 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 ATP8A1Q9Y2Q0 1164 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 TRPV2Q9Y5S1 764 aa24.51■■□□□ 1.51
MSX2-201ENST00000239243 SCN10AQ9Y5Y9 1956 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 SEPT4O43236 478 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 TCF4P15884 667 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 LMAN1P49257 510 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 FLT3LGP49771 235 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 SLMAPQ14BN4 828 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 CEP85LQ5SZL2 805 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 FAM102AQ5T9C2 384 aaPredicted RBP24.5■■□□□ 1.51
MSX2-201ENST00000239243 FAM228AQ86W67 206 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 GDAP2Q9NXN4 497 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 ASIC3Q9UHC3 531 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 LRCH4O75427 683 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 RNF8O76064 485 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 ITIH2P19823 946 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 EIF3BP55884 814 aaKnown RBP24.5■■□□□ 1.51
MSX2-201ENST00000239243 NBPF20Q3BBV1 942 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 SV2CQ496J9 727 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 ATP13A4Q4VNC1 1196 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 TTMPQ5BVD1 217 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 MFSD7Q6UXD7 560 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 OR6B3Q8NGW1 331 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 ARL8AQ96BM9 186 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 KLHL11Q9NVR0 708 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 ASNSD1Q9NWL6 643 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 KLK14Q9P0G3 267 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 EFR3BQ9Y2G0 817 aa24.5■■□□□ 1.51
MSX2-201ENST00000239243 R3HDM2Q9Y2K5 976 aaKnown RBP24.5■■□□□ 1.51
MSX2-201ENST00000239243 KPNA7A9QM74 516 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 PI4K2BG5E9Z4 385 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 H0YGN5 161 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 MYZAPP0CAP1 466 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 TAF6P49848 677 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 SLC25A11Q02978 314 aaKnown RBP24.49■■□□□ 1.51
MSX2-201ENST00000239243 CAV1Q03135 178 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 KCTD19Q17RG1 926 aaPredicted RBP24.49■■□□□ 1.51
MSX2-201ENST00000239243 DRICH1Q6PGQ1 229 aaPredicted RBP24.49■■□□□ 1.51
MSX2-201ENST00000239243 CXCL17Q6UXB2 119 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 ACOT1Q86TX2 421 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 C12orf29Q8N999 325 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 SMG8Q8ND04 991 aaKnown RBP24.49■■□□□ 1.51
MSX2-201ENST00000239243 SNF8Q96H20 258 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 TSPYL1Q9H0U9 437 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 GABRQQ9UN88 632 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 NFS1Q9Y697 457 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 LRRD1A4D1F6 860 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 HMGB1P1B2RPK0 211 aaPredicted RBP24.49■■□□□ 1.51
MSX2-201ENST00000239243 PMS2P54278 862 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 SOWAHAQ2M3V2 549 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 PPP1R26Q5T8A7 1209 aaPredicted RBP24.49■■□□□ 1.51
MSX2-201ENST00000239243 ARHGAP17Q68EM7 881 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 HACE1Q8IYU2 909 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 CCDC89Q8N998 374 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 ARHGAP39Q9C0H5 1083 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 CDY2AQ9Y6F7 541 aa24.49■■□□□ 1.51
MSX2-201ENST00000239243 hCG_1818297A0A087WSY0 165 aa24.48■■□□□ 1.51
MSX2-201ENST00000239243 TMEM88BA6NKF7 163 aa24.48■■□□□ 1.51
MSX2-201ENST00000239243 A8MXQ7 604 aa24.48■■□□□ 1.51
MSX2-201ENST00000239243 ZNF365Q70YC5 407 aa24.48■■□□□ 1.51
MSX2-201ENST00000239243 BBOF1Q8ND07 529 aa24.48■■□□□ 1.51
MSX2-201ENST00000239243 CCHCR1Q8TD31 782 aa24.48■■□□□ 1.51
MSX2-201ENST00000239243 STK32AQ8WU08 396 aa24.48■■□□□ 1.51
MSX2-201ENST00000239243 RNF39Q9H2S5 420 aa24.48■■□□□ 1.51
MSX2-201ENST00000239243 PABPC3Q9H361 631 aaKnown RBP24.48■■□□□ 1.51
MSX2-201ENST00000239243 PGK1P00558 417 aa24.47■■□□□ 1.51
MSX2-201ENST00000239243 ZNF143P52747 638 aaPredicted RBP24.47■■□□□ 1.51
MSX2-201ENST00000239243 PKDCCQ504Y2 493 aa24.47■■□□□ 1.51
MSX2-201ENST00000239243 PAXIP1Q6ZW49 1069 aaPredicted RBP24.47■■□□□ 1.51
MSX2-201ENST00000239243 EMC1Q8N766 993 aa24.47■■□□□ 1.51
MSX2-201ENST00000239243 ATP6V1G3Q96LB4 118 aa24.47■■□□□ 1.51
MSX2-201ENST00000239243 ZIC5Q96T25 663 aa24.47■■□□□ 1.51
MSX2-201ENST00000239243 CHST12Q9NRB3 414 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms