RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 DNAI2Q9GZS0 605 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 SYNCQ9H7C4 482 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 HESX1Q9UBX0 185 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 TDRD15B5MCY1 1934 aaKnown RBP16.07■□□□□ 0.16
HDHD3-201ENST00000238379 GOLGA8SH3BPF8 625 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 TULP2O00295 520 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 ATP2C2O75185 946 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 KRT3P12035 628 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 H2AFXP16104 143 aaPredicted RBP16.07■□□□□ 0.16
HDHD3-201ENST00000238379 RFC1P35251 1148 aaPredicted RBP16.07■□□□□ 0.16
HDHD3-201ENST00000238379 OGDHQ02218 1023 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 TLE2Q04725 743 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 ZNF211Q13398 564 aaPredicted RBP16.07■□□□□ 0.16
HDHD3-201ENST00000238379 C1orf53Q5VUE5 145 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 PMF1Q6P1K2 205 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 ANKRD52Q8NB46 1076 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 B3GALNT2Q8NCR0 500 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.07■□□□□ 0.16
HDHD3-201ENST00000238379 STK32AQ8WU08 396 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 SEPT8Q92599 483 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 ARMC5Q96C12 935 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 SLC4A5Q9BY07 1137 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 HIPK3Q9H422 1215 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 TMEM161AQ9NX61 479 aa16.07■□□□□ 0.16
HDHD3-201ENST00000238379 DCDC2CA8MYV0 355 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 B4GALT3O60512 393 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 HSPA8P11142 646 aaKnown RBP16.06■□□□□ 0.16
HDHD3-201ENST00000238379 PAX3P23760 479 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 PDE4CQ08493 712 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 DSC1Q08554 894 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 TCTN1Q2MV58 587 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 TRIM60Q495X7 471 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 NOMO2Q5JPE7 1267 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 KIAA0319Q5VV43 1072 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 DAB2IPQ5VWQ8 1189 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 FBXO38Q6PIJ6 1188 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 IPO4Q8TEX9 1081 aaKnown RBP16.06■□□□□ 0.16
HDHD3-201ENST00000238379 PNKPQ96T60 521 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 ELAC1Q9H777 363 aaKnown RBP16.06■□□□□ 0.16
HDHD3-201ENST00000238379 ST7Q9NRC1 585 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 DDX43Q9NXZ2 648 aaKnown RBP16.06■□□□□ 0.16
HDHD3-201ENST00000238379 LCMT1Q9UIC8 334 aa16.06■□□□□ 0.16
HDHD3-201ENST00000238379 TIMM13Q9Y5L4 95 aaPredicted RBP16.06■□□□□ 0.16
HDHD3-201ENST00000238379 E5RJQ4 531 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 GABBR2O75899 941 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 DDHD2O94830 711 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 FGGP02679 453 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 PYGMP11217 842 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 PTPN1P18031 435 aaKnown RBP16.05■□□□□ 0.16
HDHD3-201ENST00000238379 ACAT1P24752 427 aaKnown RBP16.05■□□□□ 0.16
HDHD3-201ENST00000238379 ADORA2BP29275 332 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 LHX1P48742 406 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 RWDD2BP57060 319 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 PAN2Q504Q3 1202 aaKnown RBP16.05■□□□□ 0.16
HDHD3-201ENST00000238379 AADACL2Q6P093 401 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 DCLRE1AQ6PJP8 1040 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 TMEM110Q86TL2 294 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 ZNF280BQ86YH2 543 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 NIPA2Q8N8Q9 360 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 TET1Q8NFU7 2136 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 JOSD2Q8TAC2 188 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 SLC2A14Q8TDB8 520 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 DIS3LQ8TF46 1054 aaKnown RBP16.05■□□□□ 0.16
HDHD3-201ENST00000238379 APBB2Q92870 758 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 SCLYQ96I15 445 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 HNRNPABQ99729 332 aaKnown RBP16.05■□□□□ 0.16
HDHD3-201ENST00000238379 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
HDHD3-201ENST00000238379 I3L4J1 428 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 CXCL10P02778 98 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 TKTP29401 623 aaKnown RBP16.05■□□□□ 0.16
HDHD3-201ENST00000238379 BRCC3P46736 316 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 RGS7P49802 495 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 BCAT1P54687 386 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 CCL23P55773 120 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 TAS2R40P59535 323 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 BST2Q10589 180 aaKnown RBP16.05■□□□□ 0.16
HDHD3-201ENST00000238379 PIGHQ14442 188 aaPredicted RBP16.05■□□□□ 0.16
HDHD3-201ENST00000238379 CCDC142Q17RM4 750 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 FUKQ8N0W3 1084 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 FNIP1Q8TF40 1166 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 LRRC1Q9BTT6 524 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 MIS12Q9H081 205 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 KANSL3Q9P2N6 904 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 RAB21Q9UL25 225 aa16.05■□□□□ 0.16
HDHD3-201ENST00000238379 F8VP50 259 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 M0QZQ0 153 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 CYP11A1P05108 521 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 ITGB1P05556 798 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 ODC1P11926 461 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 RPL34P49207 117 aaKnown RBP16.04■□□□□ 0.16
HDHD3-201ENST00000238379 RBM10P98175 930 aaKnown RBP16.04■□□□□ 0.16
HDHD3-201ENST00000238379 PAQR9Q6ZVX9 377 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 RHOT1Q8IXI2 618 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 SPATA18Q8TC71 538 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 URGCPQ8TCY9 931 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 RSPH1Q8WYR4 309 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 AP1M1Q9BXS5 423 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 PPP1R12CQ9BZL4 782 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 CRTAC1Q9NQ79 661 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 METTL5Q9NRN9 209 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms