RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ADCY3O60266 1144 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 ZWINTO95229 277 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 CIITAP33076 1130 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 CCNG2Q16589 344 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 GRAMD1BQ3KR37 738 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 TMEM110Q86TL2 294 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 ALYREFQ86V81 257 aaKnown RBP14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 ARHGAP24Q8N264 748 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 SMYD3Q9H7B4 428 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 BARX2Q9UMQ3 279 aaPredicted RBP14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 DOLKQ9UPQ8 538 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 DENND3A2RUS2 1198 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 MYL2P10916 166 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 ZNF24P17028 368 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 ADRA2BP18089 450 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 NFX1Q12986 1120 aaKnown RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 KCNT1Q5JUK3 1230 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 TXNRD3NBQ6F5E7 133 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 DUS1LQ6P1R4 473 aaKnown RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 NCCRP1Q6ZVX7 275 aaPredicted RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 NANOGNBQ7Z5D8 188 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 CTAGE3PQ8IX95 158 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 ZCCHC9Q8N567 271 aaKnown RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 BBOF1Q8ND07 529 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 CDCA7Q9BWT1 371 aaPredicted RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 SHCBP1LQ9BZQ2 653 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 ZNF395Q9H8N7 513 aaPredicted RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 C1orf112Q9NSG2 853 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 TAS2R1Q9NYW7 299 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 PSMC3IPQ9P2W1 217 aaPredicted RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 SMG5Q9UPR3 1016 aaKnown RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 STK24Q9Y6E0 443 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 HNRNPDLO14979 420 aaKnown RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 MYCLP12524 364 aaPredicted RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 STAT2P52630 851 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 ALCAMQ13740 583 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 RGS9BPQ6ZS82 235 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 CENPUQ71F23 418 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 FBXO27Q8NI29 283 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 TDRD3Q9H7E2 651 aaKnown RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 SPATA7Q9P0W8 599 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 PI4KBQ9UBF8 816 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 PPARGC1AQ9UBK2 798 aaKnown RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 PCDHB4Q9Y5E5 795 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 IKBKGQ9Y6K9 419 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 PLIN4Q96Q06 1357 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 ECE2O60344 883 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 E2F6O75461 281 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 TRPA1O75762 1119 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 ANPEPP15144 967 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 ADSSP30520 456 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 DSG3P32926 999 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 AP2B1P63010 937 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 SLC45A4Q5BKX6 768 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 DCUN1D2Q6PH85 259 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 STKLD1Q8NE28 680 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 RAB3IL1Q8TBN0 382 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 PPP2R3CQ969Q6 453 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 ERLEC1Q96DZ1 483 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 HSFX1Q9UBD0 423 aa14.82□□□□□ -0.04
PCDHB3-201ENST00000231130 GRIN3BO60391 1043 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 MTA2O94776 668 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 ZFXP17010 805 aaPredicted RBP14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 BASP1P80723 227 aaKnown RBP14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 DDX1Q92499 740 aaKnown RBP14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 AZIN2Q96A70 460 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 PAFAH2Q99487 392 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 NYAP2Q9P242 653 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 KANSL3Q9P2N6 904 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 AGTPBP1Q9UPW5 1226 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 F8VP50 259 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 C2CD2LO14523 706 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 DNALI1O14645 258 aaPredicted RBP14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 LSM1O15116 133 aaKnown RBP14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 LPXNO60711 386 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 PROSCO94903 275 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 MT-ND3P03897 115 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 HIF1AQ16665 826 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 SEZ6Q53EL9 994 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 LIN9Q5TKA1 542 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 ANKRD22Q5VYY1 191 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 SYDE1Q6ZW31 735 aaPredicted RBP14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 NLRX1Q86UT6 975 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 CCDC124Q96CT7 223 aaKnown RBP14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 RILPQ96NA2 401 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 HAPLN3Q96S86 360 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 MECRQ9BV79 373 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 IVNS1ABPQ9Y6Y0 642 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 UMODL1Q5DID0 1318 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 SERPINB6P35237 376 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 ACOT2P49753 483 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 CDC16Q13042 620 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 SH3D19Q5HYK7 790 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 ABHD8Q96I13 439 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 SLC13A1Q9BZW2 595 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 KCNH7Q9NS40 1196 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 TUBGCP4Q9UGJ1 667 aa14.81□□□□□ -0.04
PCDHB3-201ENST00000231130 GMEB1Q9Y692 573 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms