RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 MAFGO15525 162 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 PLEKP08567 350 aaPredicted RBP12.01□□□□□ -0.49
LAMA4-201ENST00000230538 HIST2H2ACQ16777 129 aaPredicted RBP12.01□□□□□ -0.49
LAMA4-201ENST00000230538 WLSQ5T9L3 541 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 TDRD10Q5VZ19 366 aaKnown RBP12.01□□□□□ -0.49
LAMA4-201ENST00000230538 HIST2H2AA3Q6FI13 130 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 SDE2Q6IQ49 451 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 ACAD10Q6JQN1 1059 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 SYN2Q92777 582 aaPredicted RBP12.01□□□□□ -0.49
LAMA4-201ENST00000230538 PRPF18Q99633 342 aaKnown RBP12.01□□□□□ -0.49
LAMA4-201ENST00000230538 CRLS1Q9UJA2 301 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 MAPRE1Q15691 268 aaKnown RBP12.01□□□□□ -0.49
LAMA4-201ENST00000230538 CASKIN2Q8WXE0 1202 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 DNAJC9Q8WXX5 260 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 GJD4Q96KN9 370 aaPredicted RBP12.01□□□□□ -0.49
LAMA4-201ENST00000230538 TBC1D23Q9NUY8 699 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 SOAT2O75908 522 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 FDFT1P37268 417 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 PNPLA4P41247 253 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 CTCFP49711 727 aaPredicted RBP12.01□□□□□ -0.49
LAMA4-201ENST00000230538 RPS6P62753 249 aaKnown RBP12.01□□□□□ -0.49
LAMA4-201ENST00000230538 CNDP1Q96KN2 507 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 CCT7Q99832 543 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 ANKEF1Q9NU02 776 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 SETBP1Q9Y6X0 1596 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 PNPLA6Q8IY17 1366 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 MLNP12872 115 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 AVPR1AP37288 418 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 TAF6P49848 677 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 CPT1AP50416 773 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 FAM83EQ2M2I3 478 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 IYDQ6PHW0 289 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 C11orf74Q86VG3 221 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 C1orf131Q8NDD1 294 aaKnown RBP12.01□□□□□ -0.49
LAMA4-201ENST00000230538 CHST13Q8NET6 341 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 KCNH7Q9NS40 1196 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 WWOXQ9NZC7 414 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 MPP6Q9NZW5 540 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 SPASTQ9UBP0 616 aa12.01□□□□□ -0.49
LAMA4-201ENST00000230538 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
LAMA4-201ENST00000230538 INO80Q9ULG1 1556 aaPredicted RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 VWA5AO00534 786 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 ZBTB22O15209 634 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 ANXA9O76027 345 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 UBTFL6P0CB48 400 aaPredicted RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 SEC24CP53992 1094 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 CSE1LP55060 971 aaKnown RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 MAP3K7CLP57077 242 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 BTKQ06187 659 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 TP53BP2Q13625 1128 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 SF3B3Q15393 1217 aaKnown RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 ATP6V0D2Q8N8Y2 350 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 IL25Q9H293 177 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 DPP3Q9NY33 737 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12□□□□□ -0.49
LAMA4-201ENST00000230538 TBX20Q9UMR3 447 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 LRRIQ3A6PVS8 624 aaPredicted RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 IGF2BP3O00425 579 aaKnown RBP eCLIP12□□□□□ -0.49
LAMA4-201ENST00000230538 ODC1P11926 461 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 P3H2Q8IVL5 708 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 FAM151AQ8WW52 585 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 AGBL1Q96MI9 1066 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 SLITRK1Q96PX8 696 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 USE1Q9NZ43 259 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 HACL1Q9UJ83 578 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 XPO1O14980 1071 aaKnown RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 TCF3P15923 654 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 CLK1P49759 484 aaKnown RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 SLC29A2Q14542 456 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 KHDRBS2Q5VWX1 349 aaKnown RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 PRR5LQ6MZQ0 368 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 ZNF513Q8N8E2 541 aaPredicted RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 WDCPQ9H6R7 721 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 LOC100653049A0A140TA62 436 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 RRN3P2A6NIE6 340 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 CCT8L1PA6NM43 557 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 M0R3G1 203 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 KRT34O76011 436 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 KLRC1P26715 233 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 CPA2P48052 419 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 CUL2Q13617 745 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 SLC9A5Q14940 896 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 KCTD17Q8N5Z5 321 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 ANKS1AQ92625 1134 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 TADA1Q96BN2 335 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 ECSITQ9BQ95 431 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 THAP2Q9H0W7 228 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 TMEM245Q9H330 911 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 TRMT6Q9UJA5 497 aaKnown RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 HPS5Q9UPZ3 1129 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 PSTPIP1O43586 416 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 APOA4P06727 396 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 EPB42P16452 691 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 HSD17B3P37058 310 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 NPEPPSP55786 919 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 TBL3Q12788 808 aaKnown RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 PTGISQ16647 500 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 ARHGAP15Q53QZ3 475 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 DENND5BQ6ZUT9 1274 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 MMGT1Q8N4V1 131 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms