RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 LAMB4A4D0S4 1761 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 TRAV19A0A0A6YYK7 116 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 CSH1P0DML2 217 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 CSH2P0DML3 217 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 DARSP14868 501 aaKnown RBP8.36□□□□□ -1.07
NANOG-201ENST00000229307 SLC39A12Q504Y0 691 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 CENPPQ6IPU0 288 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 SPOPLQ6IQ16 392 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 ARHGAP24Q8N264 748 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 C1orf131Q8NDD1 294 aaKnown RBP8.36□□□□□ -1.07
NANOG-201ENST00000229307 WHAMMQ8TF30 809 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 RILPQ96NA2 401 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.36□□□□□ -1.07
NANOG-201ENST00000229307 TMEM117Q9H0C3 514 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 EPB41L5Q9HCM4 733 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 CDH9Q9ULB4 789 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 GPC4O75487 556 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 KRT38O76015 456 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 ASS1P00966 412 aaKnown RBP8.36□□□□□ -1.07
NANOG-201ENST00000229307 ARL4DP49703 201 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 PSEN1P49768 467 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 TKTL1P51854 596 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 GTF2BQ00403 316 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 KLHL38Q2WGJ6 581 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 DSG4Q86SJ6 1040 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 MIB1Q86YT6 1006 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 ENGASEQ8NFI3 743 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 ETNPPLQ8TBG4 499 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 ACO2Q99798 780 aaKnown RBP8.36□□□□□ -1.07
NANOG-201ENST00000229307 PLCD4Q9BRC7 762 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 NIFKQ9BYG3 293 aaKnown RBP8.36□□□□□ -1.07
NANOG-201ENST00000229307 FRMD8P1Q9BZ68 369 aaPredicted RBP8.36□□□□□ -1.07
NANOG-201ENST00000229307 UBXN6Q9BZV1 441 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 CCDC151A5D8V7 595 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 FAM187AA6NFU0 413 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 SMAPO00193 183 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 GLUD1P00367 558 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 SLURP2P0DP57 97 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 GALCP54803 685 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 CAPSQ13938 189 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 LLGL1Q15334 1064 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 SYTL3Q4VX76 610 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 FBXO46Q6PJ61 603 aaPredicted RBP8.36□□□□□ -1.07
NANOG-201ENST00000229307 SV2AQ7L0J3 742 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 CARNMT1Q8N4J0 409 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 ANKRD42Q8N9B4 389 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 CLEC4DQ8WXI8 215 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 SH3KBP1Q96B97 665 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 DRC3Q9H069 523 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 GTF3C4Q9UKN8 822 aa8.36□□□□□ -1.07
NANOG-201ENST00000229307 N4BP2Q86UW6 1770 aaPredicted RBP8.36□□□□□ -1.07
NANOG-201ENST00000229307 RHOCP08134 193 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 DDX5P17844 614 aaKnown RBP8.35□□□□□ -1.07
NANOG-201ENST00000229307 GLUD2P49448 558 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 STX1BP61266 288 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 PDK2Q15119 407 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 PSMD5Q16401 504 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 NXNQ6DKJ4 435 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 KIAA0319LQ8IZA0 1049 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 MCUQ8NE86 351 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 C18orf25Q96B23 403 aaPredicted RBP8.35□□□□□ -1.07
NANOG-201ENST00000229307 AP1M1Q9BXS5 423 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 ZNF214Q9UL59 606 aaPredicted RBP8.35□□□□□ -1.07
NANOG-201ENST00000229307 SLC30A1Q9Y6M5 507 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 SPEF2Q9C093 1822 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 COL2A1P02458 1487 aaPredicted RBP8.35□□□□□ -1.07
NANOG-201ENST00000229307 ERICH4A6NGS2 130 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 ATP9AO75110 1047 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 CXCL14O95715 111 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 PON1P27169 355 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 CXCR5P32302 372 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 RENBPP51606 427 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 ZNF135P52742 658 aaPredicted RBP8.35□□□□□ -1.07
NANOG-201ENST00000229307 HIRAP54198 1017 aaPredicted RBP8.35□□□□□ -1.07
NANOG-201ENST00000229307 EIF3BP55884 814 aaKnown RBP8.35□□□□□ -1.07
NANOG-201ENST00000229307 GCNT1Q02742 428 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 NR1I3Q14994 352 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 HAS1Q92839 578 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 TLE6Q9H808 572 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 DNAJC18Q9H819 358 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 MRPS23Q9Y3D9 190 aaKnown RBP8.35□□□□□ -1.07
NANOG-201ENST00000229307 MYH14Q7Z406 1995 aaKnown RBP8.35□□□□□ -1.07
NANOG-201ENST00000229307 EXOC1LA0A1B0GW35 172 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 PHF20L1A8MW92 1017 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 EBAG9O00559 213 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 GRAP2O75791 330 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 KRT14P02533 472 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 KCNA2P16389 499 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 EPHB2P29323 1055 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 CCR1P32246 355 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 TUSC3Q13454 348 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 ELF2Q15723 593 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 NPAS4Q8IUM7 802 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 C17orf53Q8N3J3 647 aaPredicted RBP8.35□□□□□ -1.07
NANOG-201ENST00000229307 SLC35G2Q8TBE7 412 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 ZNF296Q8WUU4 475 aaPredicted RBP8.35□□□□□ -1.07
NANOG-201ENST00000229307 FMO2Q99518 471 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 KDM3BQ7LBC6 1761 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 DNAJC6O75061 913 aa8.35□□□□□ -1.07
NANOG-201ENST00000229307 ATP2C2O75185 946 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms