RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 AURKCQ9UQB9 309 aa14.35□□□□□ -0.11
NFKB1-201ENST00000226574 KAT6AQ92794 2004 aa14.35□□□□□ -0.11
NFKB1-201ENST00000226574 C3P01024 1663 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 CES2O00748 559 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 SRGAP2BP0DMP2 458 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 NCALDP61601 193 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 FAAP100Q0VG06 881 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 FITM2Q8N6M3 262 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 GABPB2Q8TAK5 448 aaPredicted RBP14.34□□□□□ -0.11
NFKB1-201ENST00000226574 SKA2Q8WVK7 121 aaPredicted RBP14.34□□□□□ -0.11
NFKB1-201ENST00000226574 SEMA4DQ92854 862 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 HSD17B14Q9BPX1 270 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 IL1RL2Q9HB29 575 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 XAB2Q9HCS7 855 aaKnown RBP14.34□□□□□ -0.11
NFKB1-201ENST00000226574 PAPOLBQ9NRJ5 636 aaKnown RBP14.34□□□□□ -0.11
NFKB1-201ENST00000226574 HOXC10Q9NYD6 342 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 FCHO1O14526 889 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 XPO1O14980 1071 aaKnown RBP14.34□□□□□ -0.11
NFKB1-201ENST00000226574 DNAJC8O75937 253 aaPredicted RBP14.34□□□□□ -0.11
NFKB1-201ENST00000226574 ZBTB7AO95365 584 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 PTPN4P29074 926 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 MMP13P45452 471 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 CLCN3P51790 818 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 IRX1P78414 480 aaPredicted RBP14.34□□□□□ -0.11
NFKB1-201ENST00000226574 PHEXP78562 749 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 MORF4L2Q15014 288 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 NBPF20Q3BBV1 942 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 C16orf46Q6P387 395 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 ACAD11Q709F0 780 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 ABRAQ8N0Z2 381 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 SNRNP27Q8WVK2 155 aaKnown RBP14.34□□□□□ -0.11
NFKB1-201ENST00000226574 E9PBE3 544 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 SH3BP5O60239 455 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 KLHL41O60662 606 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 TAS2R40P59535 323 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 ANKRD20A4Q4UJ75 823 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 SWT1Q5T5J6 900 aaKnown RBP14.34□□□□□ -0.11
NFKB1-201ENST00000226574 EXD1Q8NHP7 514 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 NMD3Q96D46 503 aaKnown RBP14.34□□□□□ -0.11
NFKB1-201ENST00000226574 PDCD2LQ9BRP1 358 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 EFHD1Q9BUP0 239 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 TEX13BQ9BXU2 312 aa14.34□□□□□ -0.11
NFKB1-201ENST00000226574 KBTBD13C9JR72 458 aa14.33□□□□□ -0.11
NFKB1-201ENST00000226574 O00370 1275 aa14.33□□□□□ -0.11
NFKB1-201ENST00000226574 APOEP02649 317 aa14.33□□□□□ -0.11
NFKB1-201ENST00000226574 ITGB5P18084 799 aa14.33□□□□□ -0.11
NFKB1-201ENST00000226574 KCNA4P22459 653 aa14.33□□□□□ -0.11
NFKB1-201ENST00000226574 ASTE1Q2TB18 679 aaPredicted RBP14.33□□□□□ -0.11
NFKB1-201ENST00000226574 ATXN2LQ8WWM7 1075 aaKnown RBP14.33□□□□□ -0.11
NFKB1-201ENST00000226574 GMCL1Q96IK5 515 aa14.33□□□□□ -0.11
NFKB1-201ENST00000226574 TMX2Q9Y320 296 aa14.33□□□□□ -0.11
NFKB1-201ENST00000226574 RBAK-RBAKDNI3L0D1 243 aa14.33□□□□□ -0.12
NFKB1-201ENST00000226574 SERPINB5P36952 375 aa14.33□□□□□ -0.12
NFKB1-201ENST00000226574 ZNF669Q96BR6 464 aaPredicted RBP14.33□□□□□ -0.12
NFKB1-201ENST00000226574 CCDC138Q96M89 665 aa14.33□□□□□ -0.12
NFKB1-201ENST00000226574 KREMEN1Q96MU8 473 aa14.33□□□□□ -0.12
NFKB1-201ENST00000226574 ANKEF1Q9NU02 776 aa14.33□□□□□ -0.12
NFKB1-201ENST00000226574 DNAJC16Q9Y2G8 782 aa14.33□□□□□ -0.12
NFKB1-201ENST00000226574 V9GYQ6 96 aa14.33□□□□□ -0.12
NFKB1-201ENST00000226574 DNALI1O14645 258 aaPredicted RBP14.33□□□□□ -0.12
NFKB1-201ENST00000226574 PSMD10O75832 226 aa14.33□□□□□ -0.12
NFKB1-201ENST00000226574 ICAM1P05362 532 aa14.33□□□□□ -0.12
NFKB1-201ENST00000226574 VCAM1P19320 739 aa14.33□□□□□ -0.12
NFKB1-201ENST00000226574 FASTKD3Q14CZ7 662 aaKnown RBP14.33□□□□□ -0.12
NFKB1-201ENST00000226574 TCHHL1Q5QJ38 904 aaPredicted RBP14.33□□□□□ -0.12
NFKB1-201ENST00000226574 RIBC1Q8N443 379 aaPredicted RBP14.33□□□□□ -0.12
NFKB1-201ENST00000226574 FAM136AQ96C01 138 aa14.33□□□□□ -0.12
NFKB1-201ENST00000226574 C20orf96Q9NUD7 363 aaPredicted RBP14.33□□□□□ -0.12
NFKB1-201ENST00000226574 GNGT2O14610 69 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 WDR46O15213 610 aaKnown RBP14.32□□□□□ -0.12
NFKB1-201ENST00000226574 DDX3YO15523 660 aaKnown RBP14.32□□□□□ -0.12
NFKB1-201ENST00000226574 CSPG5O95196 566 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 CALB2P22676 271 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 CAP2P40123 477 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 KBTBD12Q3ZCT8 623 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 DCAF6Q58WW2 860 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 SCUBE1Q8IWY4 988 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 SCG3Q8WXD2 468 aaKnown RBP14.32□□□□□ -0.12
NFKB1-201ENST00000226574 TASP1Q9H6P5 420 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 FAM198AQ9UFP1 575 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 WARS2Q9UGM6 360 aaKnown RBP14.32□□□□□ -0.12
NFKB1-201ENST00000226574 FRMPD4Q14CM0 1322 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 FAM237BA0A1B0GVD1 139 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 PSTPIP1O43586 416 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 KRT36O76013 467 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 UNC5CO95185 931 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 LCA5LO95447 670 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 NUDT17P0C025 328 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 TXNP10599 105 aaKnown RBP14.32□□□□□ -0.12
NFKB1-201ENST00000226574 CACNA2D1P54289 1103 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 VCPP55072 806 aaKnown RBP14.32□□□□□ -0.12
NFKB1-201ENST00000226574 CRADDP78560 199 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 DENND5BQ6ZUT9 1274 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 EME1Q96AY2 570 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 RSAD1Q9HA92 442 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 UBP1Q9NZI7 540 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 PCYOX1Q9UHG3 505 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 SLC39A10Q9ULF5 831 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 CAMTA1Q9Y6Y1 1673 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 KPNA7A9QM74 516 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms