RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.9□□□□□ -0.02
SEC61B-201ENST00000223641 MRPL17Q9NRX2 175 aaKnown RBP14.9□□□□□ -0.02
SEC61B-201ENST00000223641 TSPAN16Q9UKR8 245 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 EPN1Q9Y6I3 576 aaPredicted RBP14.9□□□□□ -0.02
SEC61B-201ENST00000223641 EIF3CLB5ME19 914 aaKnown RBP14.89□□□□□ -0.03
SEC61B-201ENST00000223641 FSCN2O14926 492 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 ZNF263O14978 683 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 GRM6O15303 877 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 ADAM12O43184 909 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 MICAL2O94851 1124 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 CCDC130P13994 396 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 GPD2P43304 727 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 KIF11P52732 1056 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 CREMQ03060 361 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 MTF1Q14872 753 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 NFE2Q16621 373 aaPredicted RBP14.89□□□□□ -0.03
SEC61B-201ENST00000223641 CFAP221Q4G0U5 840 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 TRIM72Q6ZMU5 477 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 VPS36Q86VN1 386 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 TTC30AQ86WT1 665 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 WDTC1Q8N5D0 677 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 ANKRD52Q8NB46 1076 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 SLC2A14Q8TDB8 520 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 MYLPFQ96A32 169 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 TIFAQ96CG3 184 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 FUBP3Q96I24 572 aaKnown RBP eCLIP14.89□□□□□ -0.03
SEC61B-201ENST00000223641 ZNF830Q96NB3 372 aaPredicted RBP14.89□□□□□ -0.03
SEC61B-201ENST00000223641 EIF3CQ99613 913 aaKnown RBP14.89□□□□□ -0.03
SEC61B-201ENST00000223641 ZNF518BQ9C0D4 1074 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 NGRNQ9NPE2 291 aaKnown RBP14.89□□□□□ -0.03
SEC61B-201ENST00000223641 FAM49BQ9NUQ9 324 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 NAGPAQ9UK23 515 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 MTUS1Q9ULD2 1270 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 CDY1Q9Y6F8 540 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 ATG2AQ2TAZ0 1938 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 TRANK1O15050 2925 aa14.89□□□□□ -0.03
SEC61B-201ENST00000223641 WDR27A2RRH5 827 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 NRDCO43847 1150 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 ABLIM3O94929 683 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 NDUFA10O95299 355 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 VNN2O95498 520 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 LSM8O95777 96 aaKnown RBP14.88□□□□□ -0.03
SEC61B-201ENST00000223641 OR4Q2P0C623 313 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 OR1D2P34982 312 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 CYLC1P35663 651 aaPredicted RBP14.88□□□□□ -0.03
SEC61B-201ENST00000223641 NOMO3P69849 1222 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 ROR1Q01973 937 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 CENPCQ03188 943 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 GPM6BQ13491 265 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 RAB33AQ14088 237 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 CLEC16AQ2KHT3 1053 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 PDE12Q6L8Q7 609 aaKnown RBP14.88□□□□□ -0.03
SEC61B-201ENST00000223641 C4orf50Q6ZRC1 276 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 TMC7Q7Z402 723 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 MRPL43Q8N983 215 aaKnown RBP14.88□□□□□ -0.03
SEC61B-201ENST00000223641 C2orf15Q8WU43 125 aaKnown RBP14.88□□□□□ -0.03
SEC61B-201ENST00000223641 SLC35F5Q8WV83 523 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 AUTS2Q8WXX7 1259 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 LMAN2LQ9H0V9 348 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 ISCUQ9H1K1 167 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 DEF6Q9H4E7 631 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 CSNK1G1Q9HCP0 422 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 TLR9Q9NR96 1032 aa14.88□□□□□ -0.03
SEC61B-201ENST00000223641 COLQQ9Y215 455 aaPredicted RBP14.88□□□□□ -0.03
SEC61B-201ENST00000223641 CLDN5O00501 218 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 C2CD2LO14523 706 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 TEX28O15482 410 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 AKR1B10O60218 316 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 CXCL14O95715 111 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 C1RP00736 705 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 SETSIPP0DME0 302 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 RPL17P18621 184 aaKnown RBP14.87□□□□□ -0.03
SEC61B-201ENST00000223641 DEKP35659 375 aaKnown RBP14.87□□□□□ -0.03
SEC61B-201ENST00000223641 RPL34P49207 117 aaKnown RBP14.87□□□□□ -0.03
SEC61B-201ENST00000223641 BCAT1P54687 386 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 GFPT1Q06210 699 aaPredicted RBP14.87□□□□□ -0.03
SEC61B-201ENST00000223641 GOLGA7BQ2TAP0 167 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 SLC39A12Q504Y0 691 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 TPGS2Q68CL5 300 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 DENND1BQ6P3S1 775 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 ALKBH5Q6P6C2 394 aaKnown RBP14.87□□□□□ -0.03
SEC61B-201ENST00000223641 FAM35AQ86V20 835 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 ZNF461Q8TAF7 563 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 SPPL2BQ8TCT7 592 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 STK32AQ8WU08 396 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 TCF25Q9BQ70 676 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 DUSP16Q9BY84 665 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 ABCB6Q9NP58 842 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 TMEM30AQ9NV96 361 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 HSFX1Q9UBD0 423 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 MYH10P35580 1976 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 ATP8B3O60423 1300 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 PATJQ8NI35 1801 aa14.87□□□□□ -0.03
SEC61B-201ENST00000223641 MTMR11A4FU01 709 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 C2orf71A6NGG8 1288 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 M0QYV0 167 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 RTN2O75298 545 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 CNPP09543 421 aaKnown RBP14.86□□□□□ -0.03
SEC61B-201ENST00000223641 NPR3P17342 541 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 SSTR3P32745 418 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms