RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 KHSRPQ92945 711 aaKnown RBP eCLIP25.14■■□□□ 1.61
HOMER3-201ENST00000221222 MYLPFQ96A32 169 aa25.14■■□□□ 1.61
HOMER3-201ENST00000221222 PCED1BQ96HM7 432 aa25.14■■□□□ 1.61
HOMER3-201ENST00000221222 TMEM176AQ96HP8 235 aa25.14■■□□□ 1.61
HOMER3-201ENST00000221222 NAA15Q9BXJ9 866 aaKnown RBP25.14■■□□□ 1.61
HOMER3-201ENST00000221222 GANQ9H2C0 597 aa25.14■■□□□ 1.61
HOMER3-201ENST00000221222 CRISPLD1Q9H336 500 aa25.14■■□□□ 1.61
HOMER3-201ENST00000221222 CYP4F11Q9HBI6 524 aa25.14■■□□□ 1.61
HOMER3-201ENST00000221222 CD320Q9NPF0 282 aa25.14■■□□□ 1.61
HOMER3-201ENST00000221222 PCDHB4Q9Y5E5 795 aa25.14■■□□□ 1.61
HOMER3-201ENST00000221222 ZMYND10O75800 440 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 NOL4O94818 638 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 C8AP07357 584 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 HOXA9P31269 272 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 DUSP4Q13115 394 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 ORC1Q13415 861 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 ZNF394Q53GI3 561 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 IQCEQ6IPM2 695 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 SLC7A14Q8TBB6 771 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 SHC3Q92529 594 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 LPIN3Q9BQK8 851 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 SFXN1Q9H9B4 322 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 FAM207AQ9NSI2 230 aaPredicted RBP25.13■■□□□ 1.61
HOMER3-201ENST00000221222 ZDHHC7Q9NXF8 308 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 ABI2Q9NYB9 513 aaPredicted RBP25.13■■□□□ 1.61
HOMER3-201ENST00000221222 IFNKQ9P0W0 207 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 AJAP1Q9UKB5 411 aaPredicted RBP25.13■■□□□ 1.61
HOMER3-201ENST00000221222 FHOD1Q9Y613 1164 aa25.13■■□□□ 1.61
HOMER3-201ENST00000221222 PRRG1O14668 218 aa25.12■■□□□ 1.61
HOMER3-201ENST00000221222 ZNF132P52740 706 aa25.12■■□□□ 1.61
HOMER3-201ENST00000221222 SYCE2Q6PIF2 218 aa25.12■■□□□ 1.61
HOMER3-201ENST00000221222 TMEM270Q6UE05 265 aa25.12■■□□□ 1.61
HOMER3-201ENST00000221222 SPATA2LQ8IUW3 424 aaPredicted RBP25.12■■□□□ 1.61
HOMER3-201ENST00000221222 CMASQ8NFW8 434 aaPredicted RBP25.12■■□□□ 1.61
HOMER3-201ENST00000221222 MSLNLQ96KJ4 702 aa25.12■■□□□ 1.61
HOMER3-201ENST00000221222 PAEPP09466 180 aa25.11■■□□□ 1.61
HOMER3-201ENST00000221222 ARHGAP44Q17R89 818 aa25.11■■□□□ 1.61
HOMER3-201ENST00000221222 C12orf29Q8N999 325 aa25.11■■□□□ 1.61
HOMER3-201ENST00000221222 NEK11Q8NG66 645 aa25.11■■□□□ 1.61
HOMER3-201ENST00000221222 PCMTD1Q96MG8 357 aaPredicted RBP25.11■■□□□ 1.61
HOMER3-201ENST00000221222 B3GNT5Q9BYG0 378 aa25.11■■□□□ 1.61
HOMER3-201ENST00000221222 SLC27A5Q9Y2P5 690 aa25.11■■□□□ 1.61
HOMER3-201ENST00000221222 INSL5Q9Y5Q6 135 aa25.11■■□□□ 1.61
HOMER3-201ENST00000221222 RNF225M0QZC1 329 aaPredicted RBP25.1■■□□□ 1.61
HOMER3-201ENST00000221222 EPHB6O15197 1021 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 POU2F2P09086 479 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 HNRNPA1P09651 372 aaKnown RBP eCLIP25.1■■□□□ 1.61
HOMER3-201ENST00000221222 HAPLN1P10915 354 aaPredicted RBP25.1■■□□□ 1.61
HOMER3-201ENST00000221222 PBX1P40424 430 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 MAGEA11P43364 429 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 TUFMP49411 452 aaKnown RBP25.1■■□□□ 1.61
HOMER3-201ENST00000221222 CYP27A1Q02318 531 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 PPM1LQ5SGD2 360 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 FUKQ8N0W3 1084 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 TTC9BQ8N6N2 239 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 RBBP8NLQ8NC74 664 aaPredicted RBP25.1■■□□□ 1.61
HOMER3-201ENST00000221222 HEXIM2Q96MH2 286 aaKnown RBP25.1■■□□□ 1.61
HOMER3-201ENST00000221222 C1QTNF1Q9BXJ1 281 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 RHOBTB2Q9BYZ6 727 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 KIAA1257Q9ULG3 409 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 YIPF1Q9Y548 306 aa25.1■■□□□ 1.61
HOMER3-201ENST00000221222 RFPL2O75678 378 aa25.09■■□□□ 1.61
HOMER3-201ENST00000221222 TPM3P06753 285 aa25.09■■□□□ 1.61
HOMER3-201ENST00000221222 SSTR3P32745 418 aaPredicted RBP25.09■■□□□ 1.61
HOMER3-201ENST00000221222 CDR1P51861 262 aa25.09■■□□□ 1.61
HOMER3-201ENST00000221222 CLUL1Q15846 466 aa25.09■■□□□ 1.61
HOMER3-201ENST00000221222 SARM1Q6SZW1 724 aa25.09■■□□□ 1.61
HOMER3-201ENST00000221222 VSTM1Q6UX27 236 aa25.09■■□□□ 1.61
HOMER3-201ENST00000221222 PAQR9Q6ZVX9 377 aa25.09■■□□□ 1.61
HOMER3-201ENST00000221222 HNRNPABQ99729 332 aaKnown RBP25.09■■□□□ 1.61
HOMER3-201ENST00000221222 STK33Q9BYT3 514 aa25.09■■□□□ 1.61
HOMER3-201ENST00000221222 XPO4Q9C0E2 1151 aaKnown RBP25.09■■□□□ 1.61
HOMER3-201ENST00000221222 GPR88Q9GZN0 384 aa25.09■■□□□ 1.61
HOMER3-201ENST00000221222 S1PR5Q9H228 398 aa25.09■■□□□ 1.61
HOMER3-201ENST00000221222 CEP72Q9P209 647 aa25.09■■□□□ 1.61
HOMER3-201ENST00000221222 GRXCR2A6NFK2 248 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 SPDYE4A6NLX3 237 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 CBFA2T2O43439 604 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 CYP2F1P24903 491 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 POLR2FP61218 127 aaKnown RBP25.08■■□□□ 1.61
HOMER3-201ENST00000221222 RAPGEF1Q13905 1077 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 DRAP1Q14919 205 aaPredicted RBP25.08■■□□□ 1.61
HOMER3-201ENST00000221222 MGAT5BQ3V5L5 792 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 ARHGAP17Q68EM7 881 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 CYP26C1Q6V0L0 522 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 C12orf76Q8N812 135 aaPredicted RBP25.08■■□□□ 1.61
HOMER3-201ENST00000221222 SLC2A14Q8TDB8 520 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 CYFIP2Q96F07 1278 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 SEPT5Q99719 369 aaPredicted RBP25.08■■□□□ 1.61
HOMER3-201ENST00000221222 PRKD2Q9BZL6 878 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 ZNF518BQ9C0D4 1074 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 FAM49BQ9NUQ9 324 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 C2orf16Q68DN1 1984 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 ATP8B3O60423 1300 aa25.08■■□□□ 1.61
HOMER3-201ENST00000221222 CCDC195A0A1B0GUA6 201 aa25.07■■□□□ 1.6
HOMER3-201ENST00000221222 VDRP11473 427 aa25.07■■□□□ 1.6
HOMER3-201ENST00000221222 KRT5P13647 590 aa25.07■■□□□ 1.6
HOMER3-201ENST00000221222 CCDC130P13994 396 aa25.07■■□□□ 1.6
HOMER3-201ENST00000221222 BDNFP23560 247 aa25.07■■□□□ 1.6
HOMER3-201ENST00000221222 ITIH3Q06033 890 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms