RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TRMT6Q9UJA5 497 aaKnown RBP19.71■□□□□ 0.75
SMPD3-201ENST00000219334 GTF3C4Q9UKN8 822 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 SOAT2O75908 522 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 BLVRAP53004 296 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 CPB2Q96IY4 423 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 OSMRQ99650 979 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 ADGRA2Q96PE1 1338 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 CDH2P19022 906 aaPredicted RBP19.71■□□□□ 0.75
SMPD3-201ENST00000219334 DNAJB2P25686 324 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 POU4F1Q01851 419 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 SOCS4Q8WXH5 440 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 PDCD2LQ9BRP1 358 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 SPACA6W5XKT8 324 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 A0A087WZ62 844 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 SLC12A8A0AV02 714 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 DSG3P32926 999 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 FXR1P51114 621 aaKnown RBP eCLIP19.7■□□□□ 0.74
SMPD3-201ENST00000219334 POLE2P56282 527 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 EFEMP1Q12805 493 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 ZNF284Q2VY69 593 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 CBWD2Q8IUF1 395 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 FDXACB1Q9BRP7 624 aaPredicted RBP19.7■□□□□ 0.74
SMPD3-201ENST00000219334 SPASTQ9UBP0 616 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 UNC13BO14795 1591 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 AKR1A1P14550 325 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 HIC1Q14526 733 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 TIGD7Q6NT04 549 aaPredicted RBP19.7■□□□□ 0.74
SMPD3-201ENST00000219334 C11orf96Q7Z7L8 435 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 PCYOX1LQ8NBM8 494 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 WDR48Q8TAF3 677 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 SYN2Q92777 582 aaPredicted RBP19.7■□□□□ 0.74
SMPD3-201ENST00000219334 HES6Q96HZ4 224 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 SETD4Q9NVD3 440 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 WWOXQ9NZC7 414 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 VPS28Q9UK41 221 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 PLA2G4CQ9UP65 541 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 TBKBP1A7MCY6 615 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 NPM3O75607 178 aaKnown RBP19.7■□□□□ 0.74
SMPD3-201ENST00000219334 FDPSP14324 419 aaKnown RBP19.7■□□□□ 0.74
SMPD3-201ENST00000219334 STIP1P31948 543 aaKnown RBP19.7■□□□□ 0.74
SMPD3-201ENST00000219334 RAP1GDS1P52306 607 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 RARS2Q5T160 578 aaKnown RBP19.7■□□□□ 0.74
SMPD3-201ENST00000219334 HERC6Q8IVU3 1022 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 SYTL5Q8TDW5 730 aaPredicted RBP19.7■□□□□ 0.74
SMPD3-201ENST00000219334 HASPINQ8TF76 798 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 UBXN6Q9BZV1 441 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 CIPCQ9C0C6 399 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 SLC39A10Q9ULF5 831 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 DLC1Q96QB1 1528 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 USP27XA6NNY8 438 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 ZNF185O15231 689 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 MED24O75448 989 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 CGRRF1Q99675 332 aa19.7■□□□□ 0.74
SMPD3-201ENST00000219334 NFIBO00712 420 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 FKBP9O95302 570 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 MYL4P12829 197 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 FKBP9P1Q75LS8 142 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 STAMBPL1Q96FJ0 436 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 ZNF556Q9HAH1 456 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 FAM47DPA6NHR8 397 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 HSPA1AP0DMV8 641 aaKnown RBP19.69■□□□□ 0.74
SMPD3-201ENST00000219334 HSPA1BP0DMV9 641 aaKnown RBP19.69■□□□□ 0.74
SMPD3-201ENST00000219334 DMC1Q14565 340 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 PPIL6Q8IXY8 311 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 GPC2Q8N158 579 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 GRID1Q9ULK0 1009 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 ZNF286BP0CG31 522 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 ALOX15P16050 662 aaPredicted RBP19.69■□□□□ 0.74
SMPD3-201ENST00000219334 SOAT1P35610 550 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 MAGEA4P43358 317 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 KPNA1P52294 538 aaPredicted RBP19.69■□□□□ 0.74
SMPD3-201ENST00000219334 ERAP2Q6P179 960 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 RASGRP2Q7LDG7 609 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 JAMLQ86YT9 394 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 ICA1LQ8NDH6 482 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 PLEKHA8Q96JA3 519 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 KIAA1683Q9H0B3 1180 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 RANBP17Q9H2T7 1088 aaKnown RBP19.69■□□□□ 0.74
SMPD3-201ENST00000219334 NMRK2Q9NPI5 230 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 AAR2Q9Y312 384 aaKnown RBP19.69■□□□□ 0.74
SMPD3-201ENST00000219334 DTNAQ9Y4J8 743 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 TRIM17Q9Y577 477 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 FAM107AO95990 144 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 ACADMP11310 421 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 ORC1Q13415 861 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 BTG3Q14201 252 aaPredicted RBP19.69■□□□□ 0.74
SMPD3-201ENST00000219334 GLIS2Q9BZE0 524 aaPredicted RBP19.69■□□□□ 0.74
SMPD3-201ENST00000219334 RHOCP08134 193 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 GRB10Q13322 594 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 C4orf19Q8IY42 314 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 C4orf33Q8N1A6 199 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 WDR24Q96S15 920 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 ECT2Q9H8V3 914 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 XPNPEP3Q9NQH7 507 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 NMRK1Q9NWW6 199 aa19.69■□□□□ 0.74
SMPD3-201ENST00000219334 CAMSAP1Q5T5Y3 1602 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 PLA2G4AP47712 749 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 LONRF1Q17RB8 773 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 FAM83EQ2M2I3 478 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 GJB7Q6PEY0 223 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms