RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 NRIP1P48552 1158 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 TUFMP49411 452 aaKnown RBP13.98□□□□□ -0.17
TIMP1-201ENST00000218388 FXR1P51114 621 aaKnown RBP eCLIP13.98□□□□□ -0.17
TIMP1-201ENST00000218388 CLCN4P51793 760 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 ARID5AQ03989 594 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 ADCY1Q08828 1119 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 LIN9Q5TKA1 542 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 RNF19BQ6ZMZ0 732 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 CCDC149Q6ZUS6 474 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 RTL10Q7L3V2 364 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 ADGRD2Q7Z7M1 963 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 RBM23Q86U06 439 aaKnown RBP13.98□□□□□ -0.17
TIMP1-201ENST00000218388 LRRTM3Q86VH5 581 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 ZNF677Q86XU0 584 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 DEFB123Q8N688 67 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 SLC2A14Q8TDB8 520 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 SMARCD1Q96GM5 515 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 PGLYRP2Q96PD5 576 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 HNRNPABQ99729 332 aaKnown RBP13.98□□□□□ -0.17
TIMP1-201ENST00000218388 PLEKHA4Q9H4M7 779 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 FAM49BQ9NUQ9 324 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 AIPL1Q9NZN9 384 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 MTCH2Q9Y6C9 303 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 PLXNA3P51805 1871 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 MYH10P35580 1976 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 SPDYE4A6NLX3 237 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 PRRG1O14668 218 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 NCK2O43639 380 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 FAM200BP0CF97 657 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 CCDC130P13994 396 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 CYP11B1P15538 503 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 BRD2P25440 801 aaKnown RBP13.97□□□□□ -0.17
TIMP1-201ENST00000218388 ADORA2BP29275 332 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 CLCN1P35523 988 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 MAGEA11P43364 429 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 BCAT1P54687 386 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 TBX2Q13207 712 aaPredicted RBP13.97□□□□□ -0.17
TIMP1-201ENST00000218388 PLD1Q13393 1074 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 CNGA2Q16280 664 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 MEA1Q16626 185 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 TCEAL5Q5H9L2 206 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 PPP1R26Q5T8A7 1209 aaPredicted RBP13.97□□□□□ -0.17
TIMP1-201ENST00000218388 VSTM1Q6UX27 236 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 FAM35AQ86V20 835 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 SLC47A2Q86VL8 602 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 C12orf29Q8N999 325 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 ATAD1Q8NBU5 361 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 KREMEN2Q8NCW0 462 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 OR8K1Q8NGG5 319 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 HDAC7Q8WUI4 952 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 ZNF606Q8WXB4 792 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 B3GNT5Q9BYG0 378 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 PDCL3Q9H2J4 239 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 CYP4F11Q9HBI6 524 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 KRT82Q9NSB4 513 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 TMLHEQ9NVH6 421 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 FBXW11Q9UKB1 542 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 CEP83Q9Y592 693 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 BZW2Q9Y6E2 419 aaKnown RBP13.97□□□□□ -0.17
TIMP1-201ENST00000218388 PTPRDP23468 1912 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 MTCL1Q9Y4B5 1905 aaKnown RBP13.97□□□□□ -0.17
TIMP1-201ENST00000218388 LAMA3Q16787 3333 aa13.97□□□□□ -0.17
TIMP1-201ENST00000218388 O00370 1275 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 TRIM66O15016 1216 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 PER2O15055 1255 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 ANXA13P27216 316 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 PRKCIP41743 596 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 GSDMDP57764 484 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 RPL10AP62906 217 aaKnown RBP13.96□□□□□ -0.17
TIMP1-201ENST00000218388 KLHL30Q0D2K2 578 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 DUSP4Q13115 394 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 ADGRE1Q14246 886 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 GOLGA7BQ2TAP0 167 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 MGAT5BQ3V5L5 792 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 TDRD12Q587J7 1177 aaKnown RBP13.96□□□□□ -0.17
TIMP1-201ENST00000218388 LILRA6Q6PI73 481 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 LCLAT1Q6UWP7 414 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 Q7L0L9 218 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 VPS36Q86VN1 386 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 TCEAL8Q8IYN2 117 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 FUKQ8N0W3 1084 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 SPC24Q8NBT2 197 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 EPS8L1Q8TE68 723 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 CASP10Q92851 521 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 DNAJC7Q99615 494 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 CDX2Q99626 313 aaPredicted RBP13.96□□□□□ -0.17
TIMP1-201ENST00000218388 SEPT5Q99719 369 aaPredicted RBP13.96□□□□□ -0.17
TIMP1-201ENST00000218388 MAN1C1Q9NR34 630 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 ABHD10Q9NUJ1 306 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 DZANK1Q9NVP4 752 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 TSPAN16Q9UKR8 245 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.96□□□□□ -0.17
TIMP1-201ENST00000218388 HCFC2Q9Y5Z7 792 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 MYO7AQ13402 2215 aa13.96□□□□□ -0.17
TIMP1-201ENST00000218388 M0QYV0 167 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 AP1G2O75843 785 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 SERPING1P05155 500 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 SETSIPP0DME0 302 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 HAPLN1P10915 354 aaPredicted RBP13.95□□□□□ -0.18
TIMP1-201ENST00000218388 FOSL2P15408 326 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms