RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ABHD10Q9NUJ1 306 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 PLAAQ9Y263 795 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 BCL9LQ86UU0 1499 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 SNRPFP62306 86 aaKnown RBP14.38□□□□□ -0.11
SIX4-201ENST00000216513 TSNAXIP1Q2TAA8 658 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 MOXD1Q6UVY6 613 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 HPS4Q9NQG7 708 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.38□□□□□ -0.11
SIX4-201ENST00000216513 TRAV19A0A0A6YYK7 116 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 CYP2C18P33260 490 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 RHOAP61586 193 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 SUSD6Q92537 303 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 DACT3Q96B18 629 aaPredicted RBP14.38□□□□□ -0.11
SIX4-201ENST00000216513 AHCYL2Q96HN2 611 aaKnown RBP14.38□□□□□ -0.11
SIX4-201ENST00000216513 RAB3IPQ96QF0 476 aaPredicted RBP14.38□□□□□ -0.11
SIX4-201ENST00000216513 NDRG2Q9UN36 371 aaKnown RBP14.38□□□□□ -0.11
SIX4-201ENST00000216513 HPS5Q9UPZ3 1129 aa14.38□□□□□ -0.11
SIX4-201ENST00000216513 NDUFS3O75489 264 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 CLTBP09497 229 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 MYL6P60660 151 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 RASAL3Q86YV0 1011 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 ARHGAP24Q8N264 748 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 MAML3Q96JK9 1138 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 CICQ96RK0 1608 aaPredicted RBP14.37□□□□□ -0.11
SIX4-201ENST00000216513 LACTBL1A8MY62 500 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 DUSP11O75319 330 aaKnown RBP14.37□□□□□ -0.11
SIX4-201ENST00000216513 KCNA1Q09470 495 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 PDCLQ13371 301 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 GJB7Q6PEY0 223 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 C11orf96Q7Z7L8 435 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 OMDQ99983 421 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 CLDND1Q9NY35 253 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 SPG21Q9NZD8 308 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 CRLS1Q9UJA2 301 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 PCDHB9Q9Y5E1 797 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 EXOC1LA0A1B0GW35 172 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 GOLGA8RI6L899 631 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 GSTA4O15217 222 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 RTN2O75298 545 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 BDNFP23560 247 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 EIF4BP23588 611 aaKnown RBP14.37□□□□□ -0.11
SIX4-201ENST00000216513 CHRNA3P32297 505 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 ARL4CP56559 192 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 TLE2Q04725 743 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 C2CD6Q53TS8 623 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 PTRHD1Q6GMV3 140 aaKnown RBP14.37□□□□□ -0.11
SIX4-201ENST00000216513 KIAA0319LQ8IZA0 1049 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 FMR1NBQ8N0W7 255 aaPredicted RBP14.37□□□□□ -0.11
SIX4-201ENST00000216513 VGLL2Q8N8G2 317 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 DDX47Q9H0S4 455 aaKnown RBP14.37□□□□□ -0.11
SIX4-201ENST00000216513 TRMT13Q9NUP7 481 aaKnown RBP14.37□□□□□ -0.11
SIX4-201ENST00000216513 AIPL1Q9NZN9 384 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 HSPA6P17066 643 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 ZNF280AP59817 542 aaPredicted RBP14.37□□□□□ -0.11
SIX4-201ENST00000216513 DUSP28Q4G0W2 176 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 WDR48Q8TAF3 677 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 CASS4Q9NQ75 786 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 SLC27A5Q9Y2P5 690 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 H0Y3Z8 333 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 CCL16O15467 120 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 RASSF2P50749 326 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 GPS1Q13098 491 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 GRB10Q13322 594 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 SEC23AQ15436 765 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 PSMD5Q16401 504 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 ANKMY2Q8IV38 441 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 VCXQ9H320 206 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 FBXO44Q9H4M3 255 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 ITGA11Q9UKX5 1188 aa14.37□□□□□ -0.11
SIX4-201ENST00000216513 ARHGAP10A1A4S6 786 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 ANKS3Q6ZW76 656 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.36□□□□□ -0.11
SIX4-201ENST00000216513 KCNV2Q8TDN2 545 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 CDK5RAP1Q96SZ6 601 aaKnown RBP14.36□□□□□ -0.11
SIX4-201ENST00000216513 SMYD3Q9H7B4 428 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 AKAP7Q9P0M2 348 aaPredicted RBP14.36□□□□□ -0.11
SIX4-201ENST00000216513 A0A0G2JND7 137 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 MEI4A8MW99 385 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 PKN2Q16513 984 aaKnown RBP14.36□□□□□ -0.11
SIX4-201ENST00000216513 VSIG10LQ86VR7 867 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 PPWD1Q96BP3 646 aaKnown RBP14.36□□□□□ -0.11
SIX4-201ENST00000216513 TMEM117Q9H0C3 514 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 LAG3P18627 525 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 BTBD7Q9P203 1132 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 A0A0G2JLL6 359 aaPredicted RBP14.36□□□□□ -0.11
SIX4-201ENST00000216513 PPP3CCP48454 512 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 BCAT1P54687 386 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 IRAK1BP1Q5VVH5 260 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 PRRT2Q7Z6L0 340 aaPredicted RBP14.36□□□□□ -0.11
SIX4-201ENST00000216513 ENGASEQ8NFI3 743 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 SLC13A1Q9BZW2 595 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 AASDHPPTQ9NRN7 309 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 KIF3CO14782 793 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 KDM1AO60341 852 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 PIP4K2CQ8TBX8 421 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 SMG7Q92540 1137 aaKnown RBP14.36□□□□□ -0.11
SIX4-201ENST00000216513 NUDT5Q9UKK9 219 aa14.36□□□□□ -0.11
SIX4-201ENST00000216513 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.36□□□□□ -0.11
SIX4-201ENST00000216513 ATP1A1P05023 1023 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms