RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 BOLA3Q53S33 107 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 PTRHD1Q6GMV3 140 aaKnown RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 EPS8L3Q8TE67 593 aaKnown RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 RANBP17Q9H2T7 1088 aaKnown RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 CATSPERBQ9H7T0 1116 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 EML4Q9HC35 981 aaKnown RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 CISHQ9NSE2 258 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 TRIM66O15016 1216 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 ZC3H11AO75152 810 aaKnown RBP eCLIP19.62■□□□□ 0.739e-7■□□□□ 9.3
MBD3-201ENST00000156825 VEGFAP15692 232 aaPredicted RBP19.62■□□□□ 0.73
MBD3-201ENST00000156825 ALDH1A3P47895 512 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 CNTN2Q02246 1040 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 MAPK7Q13164 816 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 THTPAQ9BU02 230 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 ASPSCR1Q9BZE9 553 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 EHD4Q9H223 541 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 MAP4P27816 1152 aaKnown RBP19.62■□□□□ 0.73
MBD3-201ENST00000156825 ELOA2Q8IYF1 753 aaPredicted RBP19.62■□□□□ 0.73
MBD3-201ENST00000156825 GMCL1P1Q8NEA9 526 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 BLOC1S5Q8TDH9 187 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 IL17RAQ96F46 866 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 TMEM121Q9BTD3 319 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 SPATC1LQ9H0A9 340 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 CD274Q9NZQ7 290 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 F8VZ95 297 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 AP1ARQ63HQ0 302 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 PPIL6Q8IXY8 311 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 OTULINQ96BN8 352 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 SEC16BQ96JE7 1060 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 CEP19Q96LK0 163 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 HPS4Q9NQG7 708 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 KLC4Q9NSK0 619 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 PRR23AA6NEV1 266 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 H3BRB1 525 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 CYTH1Q15438 398 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 PCNX4Q63HM2 1172 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 MOXD1Q6UVY6 613 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 LRIG3Q6UXM1 1119 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 TUT1Q9H6E5 874 aaKnown RBP19.62■□□□□ 0.73
MBD3-201ENST00000156825 RPS6KL1Q9Y6S9 549 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 CASTOR2A6NHX0 329 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 CYTH3O43739 400 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 MYL2P10916 166 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 ARHGEF7Q14155 803 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 PGM5Q15124 567 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 STKLD1Q8NE28 680 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 FAM172AQ8WUF8 416 aa19.62■□□□□ 0.73
MBD3-201ENST00000156825 INSRRP14616 1297 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 AVPR1AP37288 418 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 IRAK1P51617 712 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 LRRC74AQ0VAA2 488 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 TFB1MQ8WVM0 346 aaKnown RBP19.61■□□□□ 0.73
MBD3-201ENST00000156825 OTUD4Q01804 1114 aaKnown RBP19.61■□□□□ 0.73
MBD3-201ENST00000156825 CHI3L2Q15782 390 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 TBCCQ15814 346 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.61■□□□□ 0.738e-11■■■■■ 35.6
MBD3-201ENST00000156825 STAMBPL1Q96FJ0 436 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 CENPKQ9BS16 269 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 CYP24A1Q07973 514 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 GTF3C2Q8WUA4 911 aaPredicted RBP19.61■□□□□ 0.73
MBD3-201ENST00000156825 SGSM3Q96HU1 749 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 FAM111AQ96PZ2 611 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 V9GYQ6 96 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 MAP3K7CLP57077 242 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 LAMTOR4Q0VGL1 99 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 Q4G0T1 1027 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 LONP2Q86WA8 852 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.61■□□□□ 0.736e-6■■■■■ 28.1
MBD3-201ENST00000156825 DACH2Q96NX9 599 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 PNMA5Q96PV4 448 aa19.61■□□□□ 0.73
MBD3-201ENST00000156825 ADM5C9JUS6 153 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 AKAP5P24588 427 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 RGS2P41220 211 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 APOBEC3HQ6NTF7 200 aaKnown RBP19.6■□□□□ 0.73
MBD3-201ENST00000156825 ARID3BQ8IVW6 561 aaPredicted RBP19.6■□□□□ 0.73
MBD3-201ENST00000156825 FBXO25Q8TCJ0 367 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 SUFUQ9UMX1 484 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 RARRES1P49788 294 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 FCGRTP55899 365 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 CENPCQ03188 943 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 ANO5Q75V66 913 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 TMEM169Q96HH4 297 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 UBP1Q9NZI7 540 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 PCDHAC2Q9Y5I4 1007 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 EML1O00423 815 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 PNPLA4P41247 253 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 PLIN5Q00G26 463 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 KCNK18Q7Z418 384 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 TAGAPQ8N103 731 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 KCTD17Q8N5Z5 321 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 CEP41Q9BYV8 373 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 TISP43B9A030 160 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 SPTLC1O15269 473 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 TFRCP02786 760 aaKnown RBP19.6■□□□□ 0.73
MBD3-201ENST00000156825 CYP2C8P10632 490 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 SERPINB9P50453 376 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 DDR1Q08345 913 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 CDKAL1Q5VV42 579 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 ZSWIM2Q8NEG5 633 aa19.6■□□□□ 0.73
MBD3-201ENST00000156825 KCTD10Q9H3F6 313 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms