RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 GARTP22102 1010 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 PGM5Q15124 567 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 EFHC2Q5JST6 749 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 NIPA1Q7RTP0 329 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 ARHGAP22Q7Z5H3 698 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 PHF13Q86YI8 300 aaPredicted RBP11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 NLGN1Q8N2Q7 840 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 FBXO36Q8NEA4 188 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 UCMAQ8WVF2 138 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 TSSK1BQ9BXA7 367 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 ZNF341Q9BYN7 854 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 TMEM39BQ9GZU3 492 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 SHOC2Q9UQ13 582 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 CTDP1Q9Y5B0 961 aaPredicted RBP11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 hCG_1818297A0A087WSY0 165 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 AHCYL1O43865 530 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 EXTL3O43909 919 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 ZNF862O60290 1169 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 LGR5O75473 907 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 LMNAP02545 664 aaKnown RBP11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 RFC5P40937 340 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 CPA2P48052 419 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 GDF10P55107 478 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 ARL4CP56559 192 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 OGDHQ02218 1023 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 C1QBPQ07021 282 aaKnown RBP11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 RCN2Q14257 317 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 ARHGEF16Q5VV41 709 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 SNX30Q5VWJ9 437 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 SCARA3Q6AZY7 606 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 SWSAP1Q6NVH7 229 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 C15orf39Q6ZRI6 1047 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 TAS1R3Q7RTX0 852 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 LARGE2Q8N3Y3 721 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 ARL10Q8N8L6 244 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 ATP11CQ8NB49 1132 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 ZNF606Q8WXB4 792 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 BTBD10Q9BSF8 475 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 POLR3FQ9H1D9 316 aaPredicted RBP11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 SAR1AQ9NR31 198 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 AGO2Q9UKV8 859 aaKnown RBP11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 BLOC1S6Q9UL45 172 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 TELO2Q9Y4R8 837 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 NUB1Q9Y5A7 615 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 PCDHGA4Q9Y5G9 962 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 TRAFD1O14545 582 aaPredicted RBP11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 CAPN9O14815 690 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 MAP3K13O43283 966 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 MT-ND3P03897 115 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 VHLP40337 213 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 KRT76Q01546 638 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 ZNF252P-AS1Q0IIN9 211 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 OASLQ15646 514 aaKnown RBP11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 CTC1Q2NKJ3 1217 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 ACSBG2Q5FVE4 666 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 TFDP3Q5H9I0 405 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 KCNT1Q5JUK3 1230 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 ZBTB41Q5SVQ8 909 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 CYP4A22Q5TCH4 519 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 SAMD3Q8N6K7 520 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 NSL1Q96IY1 281 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 VCPIP1Q96JH7 1222 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 TMEM120AQ9BXJ8 343 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 PCDH9Q9HC56 1237 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 PCDHA10Q9Y5I2 948 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 SCN9AQ15858 1988 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 TMEM191CA6NGB0 347 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 GSC2O15499 205 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 LPXNO60711 386 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 TMEM191BP0C7N4 346 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 ESRRAP11474 423 aaPredicted RBP11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 ACADSP16219 412 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 SFNP31947 248 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 PTGER2P43116 358 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 FKBP1AP62942 108 aaKnown RBP11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 OTUD4Q01804 1114 aaKnown RBP11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 MTERF2Q49AM1 385 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 TTC7BQ86TV6 843 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 ZC3H18Q86VM9 953 aaKnown RBP11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 MFN1Q8IWA4 741 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 FAM81AQ8TBF8 368 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 ACTL9Q8TC94 416 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 TEKT4Q8WW24 435 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 SCG3Q8WXD2 468 aaKnown RBP11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 RSAD2Q8WXG1 361 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 STMN2Q93045 179 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 FAM111AQ96PZ2 611 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 RBAKQ9NYW8 714 aaPredicted RBP11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 ARMCX1Q9P291 453 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 LNPEPQ9UIQ6 1025 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 CHMP2BQ9UQN3 213 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 DRG1Q9Y295 367 aaKnown RBP11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 SLX4Q8IY92 1834 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 ZNF541Q9H0D2 1346 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 LY75O60449 1722 aa11.03□□□□□ -0.64
CX3CL1-201ENST00000006053 TCRBV7S3A2A0A539 114 aa11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 FESP07332 822 aa11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 BGNP21810 368 aa11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 BASP1P80723 227 aaKnown RBP11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 PSMD6Q15008 389 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms