RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 KIAA0319LQ8IZA0 1049 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 LARGE2Q8N3Y3 721 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 ARFGAP1Q8N6T3 406 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 BANPQ8N9N5 519 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 FAM71DQ8N9W8 422 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 JOSD2Q8TAC2 188 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 ZNF526Q8TF50 670 aaPredicted RBP14.73□□□□□ -0.05
USH1C-201ENST00000005226 MZB1Q8WU39 189 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 LRRN4Q8WUT4 740 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 DCAKDQ8WVC6 231 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 VCPIP1Q96JH7 1222 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 ZNF395Q9H8N7 513 aaPredicted RBP14.73□□□□□ -0.05
USH1C-201ENST00000005226 NMRK1Q9NWW6 199 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 SENP1Q9P0U3 644 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 FARP1Q9Y4F1 1045 aaPredicted RBP14.73□□□□□ -0.05
USH1C-201ENST00000005226 GSC2O15499 205 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 HAUS5O94927 633 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 ZWINTO95229 277 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 ARFIP2P53365 341 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 SLC18A1P54219 525 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 CLDN10P78369 228 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.72□□□□□ -0.05
USH1C-201ENST00000005226 SCYL3Q8IZE3 742 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 SLC35B2Q8TB61 432 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 TMEM120AQ9BXJ8 343 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 KCNK13Q9HB14 408 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 PCDH9Q9HC56 1237 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 SHOC2Q9UQ13 582 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 FAM237BA0A1B0GVD1 139 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 GYG2O15488 501 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 DGAT1O75907 488 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 ITGAVP06756 1048 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 YY1P25490 414 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 MYL6P60660 151 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 BASP1P80723 227 aaKnown RBP14.72□□□□□ -0.05
USH1C-201ENST00000005226 FAAP100Q0VG06 881 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 SPDYE2Q495Y8 402 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 RSBN1LQ6PCB5 846 aaPredicted RBP14.72□□□□□ -0.05
USH1C-201ENST00000005226 DRICH1Q6PGQ1 229 aaPredicted RBP14.72□□□□□ -0.05
USH1C-201ENST00000005226 ADGRD1Q6QNK2 874 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 CEP128Q6ZU80 1094 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 FBXO27Q8NI29 283 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 NKD2Q969F2 451 aaPredicted RBP14.72□□□□□ -0.05
USH1C-201ENST00000005226 ATG4CQ96DT6 458 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 TSSK1BQ9BXA7 367 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 XPO7Q9UIA9 1087 aaKnown RBP14.72□□□□□ -0.05
USH1C-201ENST00000005226 SNCAIPQ9Y6H5 919 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 TCRBV5S1A1TA0A578 114 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 C3orf70A6NLC5 250 aaPredicted RBP14.72□□□□□ -0.05
USH1C-201ENST00000005226 E5RJQ4 531 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 K7ERI5 159 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 TRAFD1O14545 582 aaPredicted RBP14.72□□□□□ -0.05
USH1C-201ENST00000005226 MT-ND3P03897 115 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 ASNSP08243 561 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 ARL4CP56559 192 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 NBPF20Q3BBV1 942 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 SNX30Q5VWJ9 437 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 VSIG10LQ86VR7 867 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 NAT8LQ8N9F0 302 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 RSAD2Q8WXG1 361 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 PTCD3Q96EY7 689 aaKnown RBP14.72□□□□□ -0.05
USH1C-201ENST00000005226 BTBD10Q9BSF8 475 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 DLGAP2Q9P1A6 1054 aa14.72□□□□□ -0.05
USH1C-201ENST00000005226 PLSCR1O15162 318 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 NVLO15381 856 aaKnown RBP14.71□□□□□ -0.05
USH1C-201ENST00000005226 LPXNO60711 386 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 PYGBP11216 843 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 KCNA2P16389 499 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 PSMA2P25787 234 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 RFC5P40937 340 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 GCLCP48506 637 aaPredicted RBP14.71□□□□□ -0.05
USH1C-201ENST00000005226 ACTR2P61160 394 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 MXRA7P84157 204 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 EMC2Q15006 297 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 NPNTQ6UXI9 565 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 ALYREFQ86V81 257 aaKnown RBP14.71□□□□□ -0.05
USH1C-201ENST00000005226 LMNTD2Q8IXW0 634 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 PPIL6Q8IXY8 311 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 VPS52Q8N1B4 723 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 ATP11CQ8NB49 1132 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 MCPH1Q8NEM0 835 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 ATP6V0A1Q93050 837 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 NSL1Q96IY1 281 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 MECRQ9BV79 373 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 TRIM55Q9BYV6 548 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 TLE6Q9H808 572 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 DCLRE1BQ9H816 532 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 UTRNP46939 3433 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 NFASCO94856 1347 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 DOCK5Q9H7D0 1870 aa14.71□□□□□ -0.05
USH1C-201ENST00000005226 ELK3P41970 407 aa14.71□□□□□ -0.06
USH1C-201ENST00000005226 RNF220Q5VTB9 566 aa14.71□□□□□ -0.06
USH1C-201ENST00000005226 DENND1BQ6P3S1 775 aa14.71□□□□□ -0.06
USH1C-201ENST00000005226 PHC3Q8NDX5 983 aa14.71□□□□□ -0.06
USH1C-201ENST00000005226 ZNF333Q96JL9 665 aa14.71□□□□□ -0.06
USH1C-201ENST00000005226 ZNF668Q96K58 619 aaPredicted RBP14.71□□□□□ -0.06
USH1C-201ENST00000005226 MTMR12Q9C0I1 747 aa14.71□□□□□ -0.06
USH1C-201ENST00000005226 ACSS3Q9H6R3 686 aa14.71□□□□□ -0.06
USH1C-201ENST00000005226 ZNF277Q9NRM2 450 aaPredicted RBP14.71□□□□□ -0.06
USH1C-201ENST00000005226 RNF146Q9NTX7 359 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms