RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Glt8d2Q640P4 349 aa19.03■□□□□ 0.64
Trim71-201ENSMUST00000111816 Prkab2Q6PAM0 271 aa19.03■□□□□ 0.64
Trim71-201ENSMUST00000111816 Q8C5C9 218 aa19.03■□□□□ 0.64
Trim71-201ENSMUST00000111816 Olfr390Q8VEZ7 311 aa19.03■□□□□ 0.64
Trim71-201ENSMUST00000111816 GsdmcQ99NB5 468 aa19.03■□□□□ 0.64
Trim71-201ENSMUST00000111816 Mcm8Q9CWV1 833 aa19.03■□□□□ 0.64
Trim71-201ENSMUST00000111816 MtpapQ9D0D3 585 aaKnown RBP19.03■□□□□ 0.64
Trim71-201ENSMUST00000111816 Ulk2Q9QY01 1037 aa19.03■□□□□ 0.64
Trim71-201ENSMUST00000111816 Pgs1Q8BHF7 553 aa19.03■□□□□ 0.64
Trim71-201ENSMUST00000111816 OafQ8QZR4 282 aa19.03■□□□□ 0.64
Trim71-201ENSMUST00000111816 Trmt112Q9DCG9 125 aa19.03■□□□□ 0.64
Trim71-201ENSMUST00000111816 Rasip1Q3U0S6 961 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Cyp7b1Q60991 507 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Klhdc10Q6PAR0 439 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Myh15E9Q264 1925 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 TraddQ3U0V2 310 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Nsl1Q8K305 281 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Psmd14O35593 310 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Smyd1P97443 490 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Nek10Q3UGM2 1111 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Kctd1Q5M956 257 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 ZfatQ7TS63 1237 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Pcdhgc5Q91XW9 944 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Scrn1Q9CZC8 414 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Dnajc12Q9R022 198 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Slc35g2D3YVE8 412 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 N4bp2l2Q8JZS6 575 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Chid1Q922Q9 393 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 MybP06876 636 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Phkg1P07934 388 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Ptpn5P54830 541 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Ksr1Q61097 873 aa19.02■□□□□ 0.64
Trim71-201ENSMUST00000111816 Gm8994E9PV04 411 aaKnown RBP19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Ap2a2P17427 938 aaKnown RBP19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 ThraP63058 492 aa19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Slc9a1Q61165 820 aa19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Slc9c1Q6UJY2 1175 aa19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Slc9a7Q8BLV3 726 aa19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Wdr35Q8BND3 1181 aa19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 ItchQ8C863 864 aa19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Ddx56Q9D0R4 546 aaKnown RBP19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Ifrd2Q9D8U0 441 aa19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Clasp1Q80TV8 1535 aaKnown RBP19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Htr3aP23979 487 aa19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Cfap52Q5F201 620 aa19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 NfkbibQ60778 359 aa19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Asz1Q8VD46 475 aa19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Ndufs3Q9DCT2 263 aaKnown RBP19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 Ddx39bQ9Z1N5 428 aaKnown RBP19.02■□□□□ 0.63
Trim71-201ENSMUST00000111816 CcnjlQ5SRT8 387 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Tmem270Q6UJB9 264 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Rps8P62242 208 aaKnown RBP19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Nr2c1Q505F1 590 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Chi3l1Q61362 389 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Ubxn7Q6P5G6 467 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Tmem154Q8C4Q9 181 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Arl10Q9QXJ4 243 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 AurkcO88445 282 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Shmt1P50431 478 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 YwhaqP68254 245 aaKnown RBP19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Ccndbp1Q3TVC7 356 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Xxylt1Q3U4G3 392 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Dnajc5gQ8C632 165 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Rbck1Q9WUB0 508 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Cdo1P60334 200 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Mmgt1Q8K273 131 aaKnown RBP19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Vps11Q91W86 941 aaKnown RBP19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Zmynd10Q99ML0 440 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 MispQ9D279 648 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Nusap1Q9ERH4 427 aaKnown RBP19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 FanceB8JJD6 213 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Zfy1P10925 782 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Orc2Q60862 576 aaKnown RBP19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Mettl25Q6NXH8 597 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Disc1Q811T9 852 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Pex26Q8BGI5 305 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Tyw1Q8BJM7 721 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 HpdlQ8K248 371 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 D6Wsu163eQ91YN0 552 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Ptges3Q9R0Q7 160 aaKnown RBP19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Sall3Q62255 1320 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Ptchd3Q0EEE2 906 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Cyth4Q80YW0 393 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Q8CD60 292 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Hspa12bQ9CZJ2 685 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Lipo1J3QME6 396 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Tph1P17532 447 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Npr1P18293 1057 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Fam83bQ0VBM2 1012 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Phc1Q64028 1012 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Ptdss1Q99LH2 473 aaKnown RBP19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Trpc4apQ9JLV2 797 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Morc1Q9WVL5 950 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Prss51A0A286YDY8 319 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 FesP16879 822 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Zfy2P20662 777 aa19.01■□□□□ 0.63
Trim71-201ENSMUST00000111816 Atpif1O35143 106 aa19■□□□□ 0.63
Trim71-201ENSMUST00000111816 Ppef2O35385 757 aa19■□□□□ 0.63
Trim71-201ENSMUST00000111816 GypcQ78HU7 95 aa19■□□□□ 0.63
Trim71-201ENSMUST00000111816 Gprc6aQ8K4Z6 928 aa19■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms