RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Prr14lE9Q7C4 1971 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Cyp2b10P12791 500 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 PdgfraP26618 1089 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Ercc5P35689 1170 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 SftpdP50404 374 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Lhx5P61375 402 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Ptprn2P80560 1001 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Gm4952Q5FW57 296 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Spata20Q80YT5 790 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Ugt3a2Q8JZZ0 523 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Pkn3Q8K045 878 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Tti1Q91V83 1085 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Tmod3Q9JHJ0 352 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Dnajc12Q9R022 198 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Serpinb6cW4VSP4 379 aa21.18■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Abcb5B5X0E4 1255 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Lipo2D3YY49 398 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Slc4a9E9PUP3 929 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 OgdhlE9Q7L0 1029 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Ptk2P34152 1090 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Mpzl3Q3V3F6 237 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Dus1lQ8C2P3 475 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Gramd4Q8CB44 633 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Arhgap18Q8K0Q5 663 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 CarfQ8VHI4 689 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Fubp1Q91WJ8 651 aaKnown RBP21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Rsph3bQ9DA80 389 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Arrdc4A0A0B4J1F4 415 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 RpsaP14206 295 aaKnown RBP21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 PrkchP23298 683 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Psmc1P62192 440 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Abi2P62484 446 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Zswim6Q80TB7 1207 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Phka2Q8BWJ3 1235 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Morc1Q9WVL5 950 aa21.17■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Nfx1B1AY10 1114 aaKnown RBP21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Apba1B2RUJ5 842 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Zscan2Q07230 614 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 C6.1alQ7M757 291 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 March4Q80TE3 409 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Trmt13Q8BYH3 481 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Mcoln2Q8K595 566 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Cuedc2Q9CXX9 284 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Mageb3Q9D2H4 330 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Fundc1Q9DB70 155 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Tacc3Q9JJ11 631 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Pid1Q3UBG2 217 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 FsbpQ8BKE5 299 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Neto2Q8BNJ6 525 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Slc35f6Q8VE96 372 aa21.16■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 LctF8VPT3 1931 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 0610012G03RikA0A0J9YTR2 95 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Tspyl1O88852 379 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Gnl1P36916 607 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 MagohP61327 146 aaKnown RBP21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Mark3Q03141 753 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Q80ZQ3 298 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Enoph1Q8BGB7 257 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Cnot10Q8BH15 744 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Kctd15Q8K0E1 283 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Erich5Q8K0S2 362 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Spats2lQ91WJ7 558 aaKnown RBP21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Q9CQC3 228 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 MagohbQ9CQL1 146 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Polr3eQ9CZT4 710 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Ms4a14A0A087WSD2 1232 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Gm382B1AXN3 1250 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Nr2c2P49117 596 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Drc1Q3USS3 753 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Gm5168Q4KL04 211 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 PighQ5M9N4 188 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Fam71bQ5STT6 665 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 HpseQ6YGZ1 535 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 UvragQ8K245 698 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Spon1Q8VCC9 807 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Trpv6Q91WD2 767 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 AslQ91YI0 464 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 1700123K08RikQ9D991 295 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Rnf138rt1Q9D9M9 248 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Cyp39a1Q9JKJ9 470 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Usp34Q6ZQ93 3582 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Ttll8A4Q9F1 832 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Lrrc73B2RWC4 316 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Hsf3D0VYS2 492 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Atf2P16951 487 aaKnown RBP21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Adcy8P97490 1249 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Asprv1Q09PK2 339 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Zbed4Q80WQ9 1168 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Ccdc50Q810U5 305 aaKnown RBP21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Uba6Q8C7R4 1053 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Uba3Q8C878 462 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 McmbpQ8R3C0 642 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Hars2Q99KK9 505 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Abcf2Q99LE6 628 aaKnown RBP21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Cetn2Q9R1K9 172 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Slc22a3Q9WTW5 551 aa21.15■□□□□ 0.98
Ctdsp1-201ENSMUST00000027367 Atp2a2O55143 1044 aaKnown RBP21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Gnat1P20612 350 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Rasgrf1P27671 1262 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Rab21P35282 222 aa21.14■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms