RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Serpinh1P19324 417 aaKnown RBP17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 HdcP23738 662 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 PkmP52480 531 aaKnown RBP17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Slc17a7Q3TXX4 560 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Togaram2Q3TYG6 1002 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 FAM120AQ6A0A9 1112 aaKnown RBP17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Gpatch2lQ6PE65 482 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Trpm4Q7TN37 1213 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Atp6v0d2Q80SY3 350 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Q80ZQ3 298 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Gjd4Q8BSD4 364 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Pak4Q8BTW9 593 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Wdr60Q8C761 999 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Stxbp5Q8K400 1152 aaKnown RBP17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Pofut2Q8VHI3 429 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 DpysQ9EQF5 519 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Trpc3Q9QZC1 836 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Zc3h7aE9PWW6 970 aaKnown RBP17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Dpysl4O35098 572 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Ifnar2O35664 513 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Timm44O35857 452 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 PigrO70570 771 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 RarbP22605 482 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 PrkcbP68404 671 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 G3bp2P97379 482 aaKnown RBP17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Fam83hQ148V8 1209 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Pi4k2aQ2TBE6 479 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Pabpn1lQ5XFR0 273 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Impg2Q80XH2 1243 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Znf276Q8CE64 614 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 4921504E06RikQ8CET2 560 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 McmbpQ8R3C0 642 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 RnpepQ8VCT3 650 aaKnown RBP17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 St13Q99L47 371 aaKnown RBP17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Cul2Q9D4H8 745 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Satl1Q9D5N8 744 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 B4galt5Q9JMK0 388 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Slc26a3Q9WVC8 757 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Arhgap42B2RQE8 841 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Sem1P60897 70 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 VcpQ01853 806 aaKnown RBP17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Syce2Q505B8 171 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Supt20hQ7TT00 530 aaKnown RBP17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 RimklbQ80WS1 387 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Chmp2bQ8BJF9 213 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Pnpt1Q8K1R3 783 aaKnown RBP17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Vmn1r199Q8R280 367 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Dtnbp1Q91WZ8 352 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Tex19.1Q99MV2 351 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Rex1bdQ9CYZ6 169 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 1700013H16RikQ9DAC5 291 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Znf536Q8K083 1302 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Bfsp1A2AMT1 669 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Rab20P35295 233 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 LeprP48356 1162 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Rasgrf2P70392 1189 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Smyd1P97443 490 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Plk1Q07832 603 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Kcnc2Q14B80 642 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 B3gnt3Q5JCS9 372 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Dpysl3Q62188 570 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Zfyve28Q6ZPK7 905 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Tas2r109Q7M707 316 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 OafQ8QZR4 282 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Isl2Q9CXV0 359 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Mrps22Q9CXW2 359 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Arhgef10Q8C033 1345 aa17.19■□□□□ 0.34
Shh-201ENSMUST00000002708 Gm27029A2A4P4 543 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Adgrf2E9Q4J9 644 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Chrm1P12657 460 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Slc10a3P21129 473 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 AmhP27106 555 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 FerP70451 823 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Serping1P97290 504 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Znf112Q0VAW7 879 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Trappc3lQ4KL14 181 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 PterQ60866 349 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Cd180Q62192 661 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Haus3Q8QZX2 570 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Olfr395Q8VGR3 312 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Gps1Q99LD4 471 aaKnown RBP17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Dusp21Q9D9D8 189 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Cetn2Q9R1K9 172 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Sbno2Q7TNB8 1349 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Disp2Q8CIP5 1345 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Gm10801F7C7Q0 168 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Srpk1O70551 648 aaKnown RBP17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Pdcd2P46718 343 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Dynlt1P51807 113 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Sh3bp2Q06649 559 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Lrrn4clQ3TYX2 239 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Fam8a1Q3URQ4 399 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Gm5168Q4KL04 211 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Pik3r5Q5SW28 871 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Grik1Q60934 836 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 MregQ6NVG5 214 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Q8CD60 292 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Lrif1Q8CDD9 755 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 OgtQ8CGY8 1046 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Sugp1Q8CH02 643 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 258.9 ms