RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Tnfaip8Q921Z5 198 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 DarsQ922B2 501 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Trp53inp1Q9QXE4 239 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Slfn3A0A1L1STQ7 640 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fbxl16A2RT62 479 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 CidebO70303 219 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 CnpP16330 420 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 SykP48025 629 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Coq7P97478 217 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rgs9bpQ148R9 237 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zmym5Q3U2E2 627 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mxd4Q60948 209 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Papd7Q6PB75 542 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 SvoplQ6PDF3 494 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 SnphQ80U23 495 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pcsk9Q80W65 694 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Thnsl1Q8BH55 747 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Afap1l1Q8BZI0 768 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zhx2Q8C0C0 836 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Btbd7Q8CFE5 1130 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cox18Q8VC74 331 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ube2sQ921J4 223 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Dhx30Q99PU8 1217 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Igf2bp3Q9CPN8 579 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Scrn1Q9CZC8 414 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tmem2Q5FWI3 1383 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Scgb2b18A0A087WPA9 112 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Atp8b4A2ANX3 1194 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 D830030K20RikE9PYQ5 218 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Abhd12bG3UZN6 359 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm3043K7N693 218 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm16440K7N6G6 218 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm2244L7N2A3 218 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm3278L7N2D2 218 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm8271L7N2E2 218 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Kpna6O35345 536 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mcpt1P11034 246 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Klra7Q60654 280 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Egfl8Q6GUQ1 293 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ube3cQ80U95 1083 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Eme1Q8BJW7 570 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Snx9Q91VH2 595 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cyp2c50Q91X77 490 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Creld1Q91XD7 420 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zmynd10Q99ML0 440 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Trpd52l3Q9CQ14 231 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Smyd3Q9CWR2 428 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zfp655Q9CZP3 541 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Spata9Q9D9R3 252 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm21488A0A087WR99 222 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Vmn2r5K7N788 911 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Calb2Q08331 271 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cyp2c67Q569X9 491 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ddx3xQ62167 662 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Znf569Q80W31 679 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nup107Q8BH74 926 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 HadhaQ8BMS1 763 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ifi44Q8BV66 422 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Olfr866Q8VFI7 312 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ppp1r3aQ99MR9 1089 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zfp780bE9Q2S6 806 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm8298J3QPI0 401 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Shoc2O88520 582 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nr2c2P49117 596 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tbx3P70324 741 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zfp607aQ3TQG9 686 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Psen2Q61144 448 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ece2Q80Z60 881 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Hspa13Q8BM72 471 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tada2aQ8CHV6 443 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Chrna3Q8R4G9 499 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Kdm4bQ91VY5 1086 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Chchd3Q9CRB9 227 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Emc2Q9CRD2 297 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Q9D1F3 157 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Terb2Q9D494 218 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ndufs3Q9DCT2 263 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Arhgef11Q68FM7 1552 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ap3d1O54774 1199 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ccnd1P25322 295 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Celf1P28659 486 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gp1bbP56400 206 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Arhgef16Q3U5C8 713 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 E2f7Q6S7F2 904 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Sel1l3Q80TS8 1137 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Oscp1Q8BHW2 379 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Leng8Q8CBY3 785 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Olfr397Q8VEZ6 315 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Atpaf2Q91YY4 289 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Trim8Q99PJ2 551 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ddx47Q9CWX9 455 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 RnmtQ9D0L8 465 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Arih1Q9Z1K5 555 aa9.5□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ssc5dQ8BV57 1371 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 A0A1Y7VIU7 259 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mup10A2BIN1 180 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mup14A2CEK7 180 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mup19A9C497 187 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mup15A9R9W0 180 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mup17B5X0G2 180 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms