RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C FAS1P07149 2051 aaKnown RBP1.54□□□□□ -2.16
NYV1YLR093C FMP49A0A023PZB3 126 aa1.53□□□□□ -2.16
NYV1YLR093C NHP6AP11632 93 aaKnown RBP1.53□□□□□ -2.16
NYV1YLR093C RPS20P38701 121 aaKnown RBP1.53□□□□□ -2.16
NYV1YLR093C HYR1P40581 163 aaKnown RBP1.53□□□□□ -2.16
NYV1YLR093C APS3P47064 194 aa1.53□□□□□ -2.16
NYV1YLR093C YAE1P47118 141 aaPredicted RBP1.53□□□□□ -2.16
NYV1YLR093C YMR252CQ04814 134 aa1.53□□□□□ -2.16
NYV1YLR093C YDR278CQ05612 105 aa1.53□□□□□ -2.16
NYV1YLR093C IRC19Q07843 230 aa1.53□□□□□ -2.16
NYV1YLR093C MRP49P32388 137 aa1.52□□□□□ -2.17
NYV1YLR093C ETR1P38071 380 aa1.52□□□□□ -2.17
NYV1YLR093C RPL13BP40212 199 aaKnown RBP1.52□□□□□ -2.17
NYV1YLR093C HPM1P40481 377 aa1.52□□□□□ -2.17
NYV1YLR093C RCF2P53721 224 aa1.52□□□□□ -2.17
NYV1YLR093C TVP18Q04767 167 aa1.52□□□□□ -2.17
NYV1YLR093C NKP2Q06162 153 aa1.52□□□□□ -2.17
NYV1YLR093C RPL13AQ12690 199 aaPredicted RBP1.52□□□□□ -2.17
NYV1YLR093C WIP1Q2V2P8 89 aa1.52□□□□□ -2.17
NYV1YLR093C SPA2P23201 1466 aaKnown RBP1.51□□□□□ -2.17
NYV1YLR093C ADE6P38972 1358 aaKnown RBP1.51□□□□□ -2.17
NYV1YLR093C RPS25BP0C0T4 108 aaKnown RBP1.51□□□□□ -2.17
NYV1YLR093C YGL010WP25338 174 aa1.51□□□□□ -2.17
NYV1YLR093C YHL042WP38729 150 aa1.51□□□□□ -2.17
NYV1YLR093C CIN5P40917 295 aa1.51□□□□□ -2.17
NYV1YLR093C YGR017WP53210 297 aa1.51□□□□□ -2.17
NYV1YLR093C YCL001W-AP87012 153 aa1.51□□□□□ -2.17
NYV1YLR093C CWC27Q02770 301 aa1.51□□□□□ -2.17
NYV1YLR093C FCY1Q12178 158 aa1.51□□□□□ -2.17
NYV1YLR093C RPS25AQ3E792 108 aaPredicted RBP1.51□□□□□ -2.17
NYV1YLR093C TAR1Q8TGM6 124 aa1.51□□□□□ -2.17
NYV1YLR093C YEL008WP40001 126 aa1.5□□□□□ -2.17
NYV1YLR093C EMC4P53073 190 aa1.5□□□□□ -2.17
NYV1YLR093C ATP19P81451 68 aa1.5□□□□□ -2.17
NYV1YLR093C ELC1Q03071 99 aa1.5□□□□□ -2.17
NYV1YLR093C RCE1Q03530 315 aa1.5□□□□□ -2.17
NYV1YLR093C NMA1Q06178 401 aaKnown RBP1.5□□□□□ -2.17
NYV1YLR093C YDL157CQ12082 118 aa1.5□□□□□ -2.17
NYV1YLR093C YNL277W-AQ3E7Z0 62 aa1.5□□□□□ -2.17
NYV1YLR093C COX5BP00425 151 aa1.49□□□□□ -2.17
NYV1YLR093C YCR050CP25630 102 aa1.49□□□□□ -2.17
NYV1YLR093C SFT1P43682 97 aa1.49□□□□□ -2.17
NYV1YLR093C VMA10P48836 114 aaKnown RBP1.49□□□□□ -2.17
NYV1YLR093C SDH7Q04401 133 aa1.49□□□□□ -2.17
NYV1YLR093C SPC24Q04477 213 aa1.49□□□□□ -2.17
NYV1YLR093C AVO2Q04749 426 aa1.49□□□□□ -2.17
NYV1YLR093C FRQ1Q06389 190 aa1.49□□□□□ -2.17
NYV1YLR093C CMC4Q3E7A9 73 aa1.49□□□□□ -2.17
NYV1YLR093C YNL146C-AQ3E7Z1 64 aa1.49□□□□□ -2.17
NYV1YLR093C QCR8P08525 94 aa1.48□□□□□ -2.17
NYV1YLR093C RPS1BP23248 255 aaKnown RBP1.48□□□□□ -2.17
NYV1YLR093C RPS1AP33442 255 aaKnown RBP1.48□□□□□ -2.17
NYV1YLR093C YKR070WP36151 352 aaKnown RBP1.48□□□□□ -2.17
NYV1YLR093C YAL064WP39711 94 aa1.48□□□□□ -2.17
NYV1YLR093C YFL065CP43539 102 aa1.48□□□□□ -2.17
NYV1YLR093C LSM8P47093 109 aaKnown RBP1.48□□□□□ -2.17
NYV1YLR093C SPG1P50088 95 aa1.48□□□□□ -2.17
NYV1YLR093C MZM1Q03429 123 aaPredicted RBP1.48□□□□□ -2.17
NYV1YLR093C KEI1Q06346 221 aa1.48□□□□□ -2.17
NYV1YLR093C YOR385WQ08909 290 aa1.48□□□□□ -2.17
NYV1YLR093C YLR099W-AQ3E798 87 aa1.48□□□□□ -2.17
NYV1YLR093C FYV5P25585 152 aa1.47□□□□□ -2.17
NYV1YLR093C UGX2P32772 223 aa1.47□□□□□ -2.17
NYV1YLR093C VMA7P39111 118 aa1.47□□□□□ -2.17
NYV1YLR093C PHS1P40857 217 aa1.47□□□□□ -2.17
NYV1YLR093C DIE2P50076 525 aa1.47□□□□□ -2.17
NYV1YLR093C SOM1Q05676 74 aa1.47□□□□□ -2.17
NYV1YLR093C SLO1Q3E784 85 aa1.47□□□□□ -2.17
NYV1YLR093C COA3Q3E7B2 85 aa1.47□□□□□ -2.17
NYV1YLR093C YGL041W-AP0C5N3 154 aa1.46□□□□□ -2.18
NYV1YLR093C YEL014CP39999 101 aa1.46□□□□□ -2.18
NYV1YLR093C MET31Q03081 177 aa1.46□□□□□ -2.18
NYV1YLR093C TMA23Q03525 211 aa1.46□□□□□ -2.18
NYV1YLR093C HSP150P32478 413 aa1.45□□□□□ -2.18
NYV1YLR093C YBR242WP38331 238 aa1.45□□□□□ -2.18
NYV1YLR093C IPT1P38954 527 aa1.45□□□□□ -2.18
NYV1YLR093C YGL230CP53074 147 aa1.45□□□□□ -2.18
NYV1YLR093C SAE3P89114 91 aa1.45□□□□□ -2.18
NYV1YLR093C YPR153WQ06537 140 aa1.45□□□□□ -2.18
NYV1YLR093C HUT1Q12520 339 aa1.45□□□□□ -2.18
NYV1YLR093C DDP1Q99321 188 aaKnown RBP1.45□□□□□ -2.18
NYV1YLR093C Q0144Q9ZZW2 109 aa1.45□□□□□ -2.18
NYV1YLR093C ADK1P07170 222 aaKnown RBP1.44□□□□□ -2.18
NYV1YLR093C FPR1P20081 114 aaKnown RBP1.44□□□□□ -2.18
NYV1YLR093C YCL042WP25572 119 aa1.44□□□□□ -2.18
NYV1YLR093C QCR10P37299 77 aa1.44□□□□□ -2.18
NYV1YLR093C GPI11Q06636 219 aa1.44□□□□□ -2.18
NYV1YLR093C YLR118CQ12354 227 aa1.44□□□□□ -2.18
NYV1YLR093C RPO41P13433 1351 aaKnown RBP1.44□□□□□ -2.18
NYV1YLR093C YOR304C-AO14468 76 aa1.43□□□□□ -2.18
NYV1YLR093C AQY2P0CD90 149 aa1.43□□□□□ -2.18
NYV1YLR093C RAF1Q06891 181 aa1.43□□□□□ -2.18
NYV1YLR093C UBR1P19812 1950 aa1.43□□□□□ -2.18
NYV1YLR093C ECM5Q03214 1411 aa1.42□□□□□ -2.18
NYV1YLR093C KIN28P06242 306 aa1.42□□□□□ -2.18
NYV1YLR093C FUN14P18411 198 aa1.42□□□□□ -2.18
NYV1YLR093C ATG8P38182 117 aaRIP-Chip data1.42□□□□□ -2.18not detected
NYV1YLR093C GAT4P40569 121 aa1.42□□□□□ -2.18
NYV1YLR093C YGL149WP53116 101 aa1.42□□□□□ -2.18
NYV1YLR093C AIM11P87275 137 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms