RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C YJR096WP47137 282 aa5.17□□□□□ -1.58
PUP2YGR253C YJR111CP47148 283 aaKnown RBP5.17□□□□□ -1.58
PUP2YGR253C SNO1Q03144 224 aa5.17□□□□□ -1.58
PUP2YGR253C TMA23Q03525 211 aa5.17□□□□□ -1.58
PUP2YGR253C ANB1P19211 157 aa5.16□□□□□ -1.58
PUP2YGR253C HSP12P22943 109 aaKnown RBP5.16□□□□□ -1.58
PUP2YGR253C CDC50P25656 391 aa5.16□□□□□ -1.58
PUP2YGR253C MRPL4P36517 319 aa5.16□□□□□ -1.58
PUP2YGR253C PEX7P39108 375 aa5.16□□□□□ -1.58
PUP2YGR253C FIT2Q08906 153 aa5.16□□□□□ -1.58
PUP2YGR253C CRC1Q12289 327 aa5.16□□□□□ -1.58
PUP2YGR253C QCR9P22289 66 aa5.15□□□□□ -1.59
PUP2YGR253C SPO13P23624 291 aa5.15□□□□□ -1.59
PUP2YGR253C IRC22P40006 225 aa5.15□□□□□ -1.59
PUP2YGR253C MRX11Q03079 207 aa5.15□□□□□ -1.59
PUP2YGR253C AVO2Q04749 426 aa5.15□□□□□ -1.59
PUP2YGR253C NPL6P32832 435 aa5.14□□□□□ -1.59
PUP2YGR253C SIT1P39980 628 aa5.14□□□□□ -1.59
PUP2YGR253C DSK2P48510 373 aa5.14□□□□□ -1.59
PUP2YGR253C YPS5P53057 165 aa5.14□□□□□ -1.59
PUP2YGR253C ATC1Q04005 294 aa5.14□□□□□ -1.59
PUP2YGR253C FCF2Q12035 217 aaPredicted RBP5.14□□□□□ -1.59
PUP2YGR253C VAR1P02381 398 aa5.13□□□□□ -1.59
PUP2YGR253C Q0255P03881 472 aa5.13□□□□□ -1.59
PUP2YGR253C MRPL20P22354 195 aaPredicted RBP5.13□□□□□ -1.59
PUP2YGR253C AHT1P29589 182 aa5.13□□□□□ -1.59
PUP2YGR253C ACB1P31787 87 aa5.13□□□□□ -1.59
PUP2YGR253C LCL2Q08045 131 aa5.13□□□□□ -1.59
PUP2YGR253C ATX2Q12067 313 aa5.13□□□□□ -1.59
PUP2YGR253C YPR053CQ6Q5F3 151 aa5.13□□□□□ -1.59
PUP2YGR253C HTB2P02294 131 aa5.12□□□□□ -1.59
PUP2YGR253C CPT1P17898 393 aa5.12□□□□□ -1.59
PUP2YGR253C CKS1P20486 150 aaKnown RBP5.12□□□□□ -1.59
PUP2YGR253C SPI1P40092 148 aa5.12□□□□□ -1.59
PUP2YGR253C HUA1P40325 198 aa5.12□□□□□ -1.59
PUP2YGR253C SPC1P46965 94 aa5.12□□□□□ -1.59
PUP2YGR253C TOM7P53507 60 aa5.12□□□□□ -1.59
PUP2YGR253C MRPL50P53724 139 aa5.12□□□□□ -1.59
PUP2YGR253C YGR240C-AQ3E786 66 aa5.12□□□□□ -1.59
PUP2YGR253C YLR302CO13544 120 aa5.11□□□□□ -1.59
PUP2YGR253C MRS1P07266 363 aa5.11□□□□□ -1.59
PUP2YGR253C RPL11AP0C0W9 174 aaKnown RBP5.11□□□□□ -1.59
PUP2YGR253C ELF1P36053 145 aa5.11□□□□□ -1.59
PUP2YGR253C CDC40P40968 455 aaPredicted RBP5.11□□□□□ -1.59
PUP2YGR253C YGL117WP53133 265 aa5.11□□□□□ -1.59
PUP2YGR253C ATP23P53722 227 aa5.11□□□□□ -1.59
PUP2YGR253C YNR066CP53752 436 aa5.11□□□□□ -1.59
PUP2YGR253C COA4Q05809 96 aa5.11□□□□□ -1.59
PUP2YGR253C RPL11BQ3E757 174 aaPredicted RBP5.11□□□□□ -1.59
PUP2YGR253C TRS20P38334 175 aa5.1□□□□□ -1.59
PUP2YGR253C RIB4P50861 169 aaPredicted RBP5.1□□□□□ -1.59
PUP2YGR253C YMR253CQ04835 414 aa5.1□□□□□ -1.59
PUP2YGR253C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
PUP2YGR253C RRT13P40042 185 aa5.09□□□□□ -1.59
PUP2YGR253C CAF40P53829 373 aa5.09□□□□□ -1.59
PUP2YGR253C PBA1Q05778 276 aa5.09□□□□□ -1.59
PUP2YGR253C YLR125WQ12138 136 aa5.09□□□□□ -1.59
PUP2YGR253C RPL31BP0C2H9 113 aaKnown RBP5.08□□□□□ -1.6
PUP2YGR253C COQ3P27680 312 aa5.08□□□□□ -1.6
PUP2YGR253C ACP1P32463 125 aa5.08□□□□□ -1.6
PUP2YGR253C NNK1P36003 928 aa5.08□□□□□ -1.6
PUP2YGR253C YMR141CP40211 102 aa5.08□□□□□ -1.6
PUP2YGR253C KEG1P43614 200 aa5.08□□□□□ -1.6
PUP2YGR253C CUP2P15315 225 aa5.07□□□□□ -1.6
PUP2YGR253C YHR173CP38864 112 aa5.07□□□□□ -1.6
PUP2YGR253C ASP1P38986 381 aaPredicted RBP5.07□□□□□ -1.6
PUP2YGR253C YCH1P42937 148 aa5.07□□□□□ -1.6
PUP2YGR253C MRPS17Q03246 237 aaPredicted RBP5.07□□□□□ -1.6
PUP2YGR253C RAV2Q03956 351 aa5.07□□□□□ -1.6
PUP2YGR253C SAR1P20606 190 aaKnown RBP5.06□□□□□ -1.6
PUP2YGR253C MAG1P22134 296 aaKnown RBP5.06□□□□□ -1.6
PUP2YGR253C TAD2P47058 250 aa5.06□□□□□ -1.6
PUP2YGR253C YDR366CP87287 132 aa5.06□□□□□ -1.6
PUP2YGR253C SDO1Q07953 250 aaKnown RBP5.06□□□□□ -1.6
PUP2YGR253C YOR015WQ12169 119 aa5.06□□□□□ -1.6
PUP2YGR253C YLL066W-BQ8TGJ7 56 aa5.06□□□□□ -1.6
PUP2YGR253C RPL16BP26785 198 aaKnown RBP5.05□□□□□ -1.6
PUP2YGR253C RPS0AP32905 252 aaKnown RBP5.05□□□□□ -1.6
PUP2YGR253C KRE9P39005 276 aa5.05□□□□□ -1.6
PUP2YGR253C YNL217WP40152 326 aa5.05□□□□□ -1.6
PUP2YGR253C YJL028WP47062 111 aa5.05□□□□□ -1.6
PUP2YGR253C DAD4P69851 72 aa5.05□□□□□ -1.6
PUP2YGR253C ANT1Q06497 328 aa5.05□□□□□ -1.6
PUP2YGR253C RTC6O14464 93 aa5.04□□□□□ -1.6
PUP2YGR253C MRPL28P36527 147 aa5.04□□□□□ -1.6
PUP2YGR253C YBR292CP38357 123 aa5.04□□□□□ -1.6
PUP2YGR253C BRP1P53194 125 aa5.04□□□□□ -1.6
PUP2YGR253C UBI4P0CG63 381 aaKnown RBP5.03□□□□□ -1.6
PUP2YGR253C YPT53P36019 220 aa5.03□□□□□ -1.6
PUP2YGR253C SRB7P47822 140 aa5.03□□□□□ -1.6
PUP2YGR253C ADD37Q03233 198 aa5.03□□□□□ -1.6
PUP2YGR253C DAD1Q12248 94 aa5.03□□□□□ -1.6
PUP2YGR253C YGL194C-AQ2V2P6 80 aa5.03□□□□□ -1.6
PUP2YGR253C YBR200W-AQ3E755 54 aa5.03□□□□□ -1.6
PUP2YGR253C YLR342W-AQ3E810 57 aa5.03□□□□□ -1.6
PUP2YGR253C AGA1P32323 725 aa5.02□□□□□ -1.61
PUP2YGR253C HMX1P32339 317 aa5.02□□□□□ -1.61
PUP2YGR253C AME1P38313 324 aa5.02□□□□□ -1.61
PUP2YGR253C LOC1P43586 204 aaPredicted RBP5.02□□□□□ -1.61
PUP2YGR253C AIM34Q03673 198 aa5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms