RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C ATP14Q12349 124 aa0.7□□□□□ -2.3
RTR1YER139C YLR361C-AQ3E795 98 aa0.7□□□□□ -2.3
RTR1YER139C YNL277W-AQ3E7Z0 62 aa0.7□□□□□ -2.3
RTR1YER139C YOR381W-AQ3E804 55 aa0.7□□□□□ -2.3
RTR1YER139C RIB3Q99258 208 aa0.7□□□□□ -2.3
RTR1YER139C RPS25BP0C0T4 108 aaKnown RBP0.69□□□□□ -2.3
RTR1YER139C AHT1P29589 182 aa0.69□□□□□ -2.3
RTR1YER139C SPT14P32363 452 aa0.69□□□□□ -2.3
RTR1YER139C SRL3P36167 246 aa0.69□□□□□ -2.3
RTR1YER139C YPT31P38555 223 aaKnown RBP0.69□□□□□ -2.3
RTR1YER139C RPS20P38701 121 aaKnown RBP0.69□□□□□ -2.3
RTR1YER139C YEL014CP39999 101 aa0.69□□□□□ -2.3
RTR1YER139C LSM8P47093 109 aaKnown RBP0.69□□□□□ -2.3
RTR1YER139C PAC10P48363 199 aa0.69□□□□□ -2.3
RTR1YER139C RCF2P53721 224 aa0.69□□□□□ -2.3
RTR1YER139C YNL019CP53975 284 aa0.69□□□□□ -2.3
RTR1YER139C YDR102CQ03864 110 aa0.69□□□□□ -2.3
RTR1YER139C YPR114WQ06107 315 aa0.69□□□□□ -2.3
RTR1YER139C HUT1Q12520 339 aa0.69□□□□□ -2.3
RTR1YER139C RPS25AQ3E792 108 aaPredicted RBP0.69□□□□□ -2.3
RTR1YER139C DDP1Q99321 188 aaKnown RBP0.69□□□□□ -2.3
RTR1YER139C Q0144Q9ZZW2 109 aa0.69□□□□□ -2.3
RTR1YER139C PHO85P17157 305 aa0.68□□□□□ -2.3
RTR1YER139C ACP1P32463 125 aa0.68□□□□□ -2.3
RTR1YER139C PRS3P38689 320 aaKnown RBP0.68□□□□□ -2.3
RTR1YER139C HPA3P39979 161 aa0.68□□□□□ -2.3
RTR1YER139C DIE2P50076 525 aa0.68□□□□□ -2.3
RTR1YER139C DYN2Q02647 92 aa0.68□□□□□ -2.3
RTR1YER139C ELP6Q04868 273 aa0.68□□□□□ -2.3
RTR1YER139C NMA1Q06178 401 aaKnown RBP0.68□□□□□ -2.3
RTR1YER139C YPR153WQ06537 140 aa0.68□□□□□ -2.3
RTR1YER139C RFU1Q08003 200 aa0.68□□□□□ -2.3
RTR1YER139C FAS1P07149 2051 aaKnown RBP0.68□□□□□ -2.3
RTR1YER139C MRPL44P19956 98 aa0.67□□□□□ -2.3
RTR1YER139C HYP2P23301 157 aaKnown RBP0.67□□□□□ -2.3
RTR1YER139C YHR140WP38842 239 aa0.67□□□□□ -2.3
RTR1YER139C MPM1P40364 252 aa0.67□□□□□ -2.3
RTR1YER139C APS3P47064 194 aa0.67□□□□□ -2.3
RTR1YER139C YGR017WP53210 297 aa0.67□□□□□ -2.3
RTR1YER139C SDH7Q04401 133 aa0.67□□□□□ -2.3
RTR1YER139C YMR320WQ04897 101 aa0.67□□□□□ -2.3
RTR1YER139C NKP2Q06162 153 aa0.67□□□□□ -2.3
RTR1YER139C IRC19Q07843 230 aa0.67□□□□□ -2.3
RTR1YER139C INO4P13902 151 aa0.66□□□□□ -2.3
RTR1YER139C MRS4P23500 304 aa0.66□□□□□ -2.3
RTR1YER139C YCL042WP25572 119 aa0.66□□□□□ -2.3
RTR1YER139C SFT2P38166 215 aa0.66□□□□□ -2.3
RTR1YER139C VMA7P39111 118 aa0.66□□□□□ -2.3
RTR1YER139C YFL065CP43539 102 aa0.66□□□□□ -2.3
RTR1YER139C AIM11P87275 137 aa0.66□□□□□ -2.3
RTR1YER139C FIT1Q04433 528 aa0.66□□□□□ -2.3
RTR1YER139C CNL1Q06333 122 aa0.66□□□□□ -2.3
RTR1YER139C YDL241WQ07738 123 aa0.66□□□□□ -2.3
RTR1YER139C NAT5Q08689 176 aa0.66□□□□□ -2.3
RTR1YER139C SCS22Q6Q595 175 aa0.66□□□□□ -2.3
RTR1YER139C RAD50P12753 1312 aa0.65□□□□□ -2.3
RTR1YER139C FMP49A0A023PZB3 126 aa0.65□□□□□ -2.31
RTR1YER139C DDR48P18899 430 aaKnown RBP0.65□□□□□ -2.31
RTR1YER139C HSP150P32478 413 aa0.65□□□□□ -2.31
RTR1YER139C ETR1P38071 380 aa0.65□□□□□ -2.31
RTR1YER139C IPT1P38954 527 aa0.65□□□□□ -2.31
RTR1YER139C PHS1P40857 217 aa0.65□□□□□ -2.31
RTR1YER139C SFT1P43682 97 aa0.65□□□□□ -2.31
RTR1YER139C VMA10P48836 114 aaKnown RBP0.65□□□□□ -2.31
RTR1YER139C ELC1Q03071 99 aa0.65□□□□□ -2.31
RTR1YER139C TMA23Q03525 211 aa0.65□□□□□ -2.31
RTR1YER139C AVO2Q04749 426 aa0.65□□□□□ -2.31
RTR1YER139C SOM1Q05676 74 aa0.65□□□□□ -2.31
RTR1YER139C GPI11Q06636 219 aa0.65□□□□□ -2.31
RTR1YER139C YIR021W-AQ3E739 70 aa0.65□□□□□ -2.31
RTR1YER139C KTI11Q3E840 82 aa0.65□□□□□ -2.31
RTR1YER139C ECM5Q03214 1411 aa0.64□□□□□ -2.31
RTR1YER139C ANB1P19211 157 aa0.64□□□□□ -2.31
RTR1YER139C RPS1BP23248 255 aaKnown RBP0.64□□□□□ -2.31
RTR1YER139C YEL008WP40001 126 aa0.64□□□□□ -2.31
RTR1YER139C HPM1P40481 377 aa0.64□□□□□ -2.31
RTR1YER139C YFL051CP43552 160 aa0.64□□□□□ -2.31
RTR1YER139C TIM8P57744 87 aa0.64□□□□□ -2.31
RTR1YER139C APS2Q00381 147 aa0.64□□□□□ -2.31
RTR1YER139C YMR252CQ04814 134 aa0.64□□□□□ -2.31
RTR1YER139C YOR385WQ08909 290 aa0.64□□□□□ -2.31
RTR1YER139C COA3Q3E7B2 85 aa0.64□□□□□ -2.31
RTR1YER139C KIN28P06242 306 aa0.63□□□□□ -2.31
RTR1YER139C PFY1P07274 126 aa0.63□□□□□ -2.31
RTR1YER139C YHR212W-AP0CX91 67 aa0.63□□□□□ -2.31
RTR1YER139C HAP3P13434 144 aa0.63□□□□□ -2.31
RTR1YER139C FYV5P25585 152 aa0.63□□□□□ -2.31
RTR1YER139C RPS1AP33442 255 aaKnown RBP0.63□□□□□ -2.31
RTR1YER139C QCR10P37299 77 aa0.63□□□□□ -2.31
RTR1YER139C YBR027CP38220 110 aa0.63□□□□□ -2.31
RTR1YER139C GAT4P40569 121 aa0.63□□□□□ -2.31
RTR1YER139C GLC8P41818 229 aa0.63□□□□□ -2.31
RTR1YER139C YJL009WP47078 108 aa0.63□□□□□ -2.31
RTR1YER139C RPL37AP49166 88 aaKnown RBP0.63□□□□□ -2.31
RTR1YER139C BRP1P53194 125 aa0.63□□□□□ -2.31
RTR1YER139C SED1Q01589 338 aa0.63□□□□□ -2.31
RTR1YER139C IRC21Q04772 201 aa0.63□□□□□ -2.31
RTR1YER139C FRQ1Q06389 190 aa0.63□□□□□ -2.31
RTR1YER139C RPO41P13433 1351 aaKnown RBP0.62□□□□□ -2.31
RTR1YER139C COX5BP00425 151 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms