RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W CUP2P15315 225 aa3.4□□□□□ -1.86
TPA1YER049W RAD23P32628 398 aaKnown RBP3.4□□□□□ -1.86
TPA1YER049W YOX1P34161 385 aa3.4□□□□□ -1.86
TPA1YER049W PHD1P36093 366 aa3.4□□□□□ -1.86
TPA1YER049W YBR090CP38253 122 aa3.4□□□□□ -1.86
TPA1YER049W MTC6P38849 526 aa3.4□□□□□ -1.86
TPA1YER049W YHR173CP38864 112 aa3.4□□□□□ -1.86
TPA1YER049W YGL230CP53074 147 aa3.4□□□□□ -1.86
TPA1YER049W YNR064CP53750 290 aa3.4□□□□□ -1.86
TPA1YER049W LPP1Q04396 274 aa3.4□□□□□ -1.86
TPA1YER049W SEC4P07560 215 aaKnown RBP3.4□□□□□ -1.87
TPA1YER049W SEC11P15367 167 aa3.4□□□□□ -1.87
TPA1YER049W UTH1P36135 365 aa3.4□□□□□ -1.87
TPA1YER049W YER084WP40057 128 aa3.4□□□□□ -1.87
TPA1YER049W HAC1P41546 238 aa3.4□□□□□ -1.87
TPA1YER049W YGL118CP53132 145 aa3.4□□□□□ -1.87
TPA1YER049W YDR366CP87287 132 aa3.4□□□□□ -1.87
TPA1YER049W LIP2Q06005 328 aa3.4□□□□□ -1.87
TPA1YER049W CSM4Q08955 156 aa3.4□□□□□ -1.87
TPA1YER049W YMR316C-AI2HB70 103 aa3.39□□□□□ -1.87
TPA1YER049W RPS2P25443 254 aaKnown RBP3.39□□□□□ -1.87
TPA1YER049W AGE2P40529 298 aa3.39□□□□□ -1.87
TPA1YER049W GON7P46984 123 aa3.39□□□□□ -1.87
TPA1YER049W BRP1P53194 125 aa3.39□□□□□ -1.87
TPA1YER049W THG1P53215 237 aaKnown RBP3.39□□□□□ -1.87
TPA1YER049W GIM5Q04493 163 aa3.39□□□□□ -1.87
TPA1YER049W PIS1P06197 220 aaKnown RBP3.38□□□□□ -1.87
TPA1YER049W PRE1P22141 198 aaKnown RBP3.38□□□□□ -1.87
TPA1YER049W HSP12P22943 109 aaKnown RBP3.38□□□□□ -1.87
TPA1YER049W ZRT1P32804 376 aa3.38□□□□□ -1.87
TPA1YER049W YJL118WP47022 219 aa3.38□□□□□ -1.87
TPA1YER049W TIM10P87108 93 aa3.38□□□□□ -1.87
TPA1YER049W YHP1Q04116 353 aa3.38□□□□□ -1.87
TPA1YER049W POS5Q06892 414 aa3.38□□□□□ -1.87
TPA1YER049W ADH2P00331 348 aaKnown RBP3.38□□□□□ -1.87
TPA1YER049W CYC3P06182 269 aa3.38□□□□□ -1.87
TPA1YER049W AQY1P0CD91 305 aa3.38□□□□□ -1.87
TPA1YER049W MRP49P32388 137 aa3.38□□□□□ -1.87
TPA1YER049W TDA4P47153 279 aa3.38□□□□□ -1.87
TPA1YER049W DUO1P53168 247 aaKnown RBP3.38□□□□□ -1.87
TPA1YER049W YGR017WP53210 297 aa3.38□□□□□ -1.87
TPA1YER049W NRM1P53718 249 aa3.38□□□□□ -1.87
TPA1YER049W YDR209CQ03480 137 aa3.38□□□□□ -1.87
TPA1YER049W FIT2Q08906 153 aa3.38□□□□□ -1.87
TPA1YER049W Q0144Q9ZZW2 109 aa3.38□□□□□ -1.87
TPA1YER049W MBF1O14467 151 aaKnown RBP3.37□□□□□ -1.87
TPA1YER049W COX2P00410 251 aa3.37□□□□□ -1.87
TPA1YER049W PRS4P38063 326 aaPredicted RBP3.37□□□□□ -1.87
TPA1YER049W CSH1P38287 376 aa3.37□□□□□ -1.87
TPA1YER049W MSL1P40567 111 aaPredicted RBP3.37□□□□□ -1.87
TPA1YER049W SSU72P53538 206 aaPredicted RBP3.37□□□□□ -1.87
TPA1YER049W MRX11Q03079 207 aa3.37□□□□□ -1.87
TPA1YER049W RAV2Q03956 351 aa3.37□□□□□ -1.87
TPA1YER049W UPS3Q04006 179 aa3.37□□□□□ -1.87
TPA1YER049W GRH1Q04410 372 aaKnown RBP3.37□□□□□ -1.87
TPA1YER049W RFM1Q12192 310 aa3.37□□□□□ -1.87
TPA1YER049W DDI2P0CH63 225 aa3.36□□□□□ -1.87
TPA1YER049W DDI3P0CH64 225 aa3.36□□□□□ -1.87
TPA1YER049W YFL068WP0CX99 160 aa3.36□□□□□ -1.87
TPA1YER049W YLL066W-AP0CY00 160 aa3.36□□□□□ -1.87
TPA1YER049W YLL067W-AP0CY01 160 aa3.36□□□□□ -1.87
TPA1YER049W RPI1P23250 407 aaKnown RBP3.36□□□□□ -1.87
TPA1YER049W BDH1P39714 382 aa3.36□□□□□ -1.87
TPA1YER049W YNL200CP40165 246 aaKnown RBP3.36□□□□□ -1.87
TPA1YER049W FSF1Q12029 327 aaKnown RBP3.36□□□□□ -1.87
TPA1YER049W YLR050CQ12155 161 aaKnown RBP3.36□□□□□ -1.87
TPA1YER049W ATO3Q12359 275 aa3.36□□□□□ -1.87
TPA1YER049W HFA1P32874 2273 aa3.36□□□□□ -1.87
TPA1YER049W MRS1P07266 363 aa3.36□□□□□ -1.87
TPA1YER049W MRPL31P14063 131 aaPredicted RBP3.36□□□□□ -1.87
TPA1YER049W NOP1P15646 327 aaKnown RBP3.36□□□□□ -1.87
TPA1YER049W FZF1P32805 299 aa3.36□□□□□ -1.87
TPA1YER049W AIM29P36154 155 aa3.36□□□□□ -1.87
TPA1YER049W RPF1P38805 295 aaKnown RBP3.36□□□□□ -1.87
TPA1YER049W MIC26P50087 233 aa3.36□□□□□ -1.87
TPA1YER049W SIP18P50263 79 aa3.36□□□□□ -1.87
TPA1YER049W YGR018CP53211 109 aa3.36□□□□□ -1.87
TPA1YER049W SWT21P53873 357 aaPredicted RBP3.36□□□□□ -1.87
TPA1YER049W NUP53Q03790 475 aa3.36□□□□□ -1.87
TPA1YER049W RUB1Q03919 77 aa3.36□□□□□ -1.87
TPA1YER049W API2Q04413 109 aa3.36□□□□□ -1.87
TPA1YER049W MSC3Q05812 728 aa3.36□□□□□ -1.87
TPA1YER049W RPL23AP0CX41 137 aaKnown RBP3.35□□□□□ -1.87
TPA1YER049W RPL23BP0CX42 137 aaKnown RBP3.35□□□□□ -1.87
TPA1YER049W RPL12AP0CX53 165 aaKnown RBP3.35□□□□□ -1.87
TPA1YER049W RPL12BP0CX54 165 aa3.35□□□□□ -1.87
TPA1YER049W ATP10P18496 279 aa3.35□□□□□ -1.87
TPA1YER049W YCR022CP25620 114 aa3.35□□□□□ -1.87
TPA1YER049W SEC72P39742 193 aaKnown RBP3.35□□□□□ -1.87
TPA1YER049W COX16P47081 118 aa3.35□□□□□ -1.87
TPA1YER049W SDS23P53172 527 aa3.35□□□□□ -1.87
TPA1YER049W VPS71Q03433 280 aa3.35□□□□□ -1.87
TPA1YER049W BET5Q03630 159 aa3.35□□□□□ -1.87
TPA1YER049W ARC18Q05933 178 aaKnown RBP3.35□□□□□ -1.87
TPA1YER049W YOS1Q3E834 85 aa3.35□□□□□ -1.87
TPA1YER049W SAL1D6W196 494 aa3.34□□□□□ -1.87
TPA1YER049W CPR1P14832 162 aaKnown RBP3.34□□□□□ -1.87
TPA1YER049W MDM10P18409 493 aa3.34□□□□□ -1.87
TPA1YER049W YPS1P32329 569 aa3.34□□□□□ -1.87
TPA1YER049W YKR070WP36151 352 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms