RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 RSPO2Q6UXX9 243 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-213ENST00000642137 LRRTM3Q86VH5 581 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 ZNF677Q86XU0 584 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 TC2NQ8N9U0 490 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 OR10T2Q8NGX3 314 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 MYCBPAPQ8TBZ2 947 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 ZNF606Q8WXB4 792 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 CYFIP2Q96F07 1278 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 KLHL5Q96PQ7 755 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 TMEM209Q96SK2 561 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 PKMYT1Q99640 499 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 EMILIN2Q9BXX0 1053 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 CRTAC1Q9NQ79 661 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 ENTPD7Q9NQZ7 604 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 ABHD10Q9NUJ1 306 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 GTF3C4Q9UKN8 822 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 CDY1Q9Y6F8 540 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 EPOPA6NHQ4 379 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 MED7O43513 233 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 ABLIM3O94929 683 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 SERPING1P05155 500 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 CYP11B1P15538 503 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 GNA15P30679 374 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 GSDMDP57764 484 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 ORC1Q13415 861 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 RAB33AQ14088 237 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 NFE2Q16621 373 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-213ENST00000642137 PTPROQ16827 1216 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 SGO2Q562F6 1265 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 TPGS2Q68CL5 300 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 SLC47A2Q86VL8 602 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 C12orf29Q8N999 325 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 ZNF461Q8TAF7 563 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 C2orf15Q8WU43 125 aaKnown RBP13.09□□□□□ -0.31
LINC00339-213ENST00000642137 AUTS2Q8WXX7 1259 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 PANX2Q96RD6 677 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 HNRNPABQ99729 332 aaKnown RBP13.09□□□□□ -0.31
LINC00339-213ENST00000642137 ZNHIT6Q9NWK9 470 aaKnown RBP13.09□□□□□ -0.31
LINC00339-213ENST00000642137 LMCD1Q9NZU5 365 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 MAFFQ9ULX9 164 aa13.09□□□□□ -0.31
LINC00339-213ENST00000642137 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.08□□□□□ -0.32
LINC00339-213ENST00000642137 HIDE1A8MVS5 230 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 RFXAPO00287 272 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 TEX28O15482 410 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 ADAM12O43184 909 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
LINC00339-213ENST00000642137 OR4Q2P0C623 313 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 CD19P15391 556 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 RPL17P18621 184 aaKnown RBP13.08□□□□□ -0.32
LINC00339-213ENST00000642137 IRS1P35568 1242 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 NDUFV1P49821 464 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 PDE6CP51160 858 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 PSMC1P62191 440 aaKnown RBP13.08□□□□□ -0.32
LINC00339-213ENST00000642137 CDK17Q00537 523 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 ROR1Q01973 937 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 ARID5AQ03989 594 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 GOLGA8FQ08AF8 430 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 GOLGA8DPQ0D2H9 430 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 KLHL30Q0D2K2 578 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 MEA1Q16626 185 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 SLC39A12Q504Y0 691 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 MDH1BQ5I0G3 518 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
LINC00339-213ENST00000642137 PLPP4Q5VZY2 271 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 HGSNATQ68CP4 663 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 GPR153Q6NV75 609 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 WDR59Q6PJI9 974 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 LCLAT1Q6UWP7 414 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 C4orf50Q6ZRC1 276 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 CCDC186Q7Z3E2 898 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 GDPD5Q8WTR4 605 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 TFAP2BQ92481 460 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 DDX1Q92499 740 aaKnown RBP13.08□□□□□ -0.32
LINC00339-213ENST00000642137 PCED1BQ96HM7 432 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 FUBP3Q96I24 572 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC00339-213ENST00000642137 LPIN3Q9BQK8 851 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 ZSWIM1Q9BR11 485 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 B3GNT5Q9BYG0 378 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 HAUS4Q9H6D7 363 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 ACP6Q9NPH0 428 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 TMLHEQ9NVH6 421 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 HSFX1Q9UBD0 423 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 PCDHGC3Q9UN70 934 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 PCDHB5Q9Y5E4 795 aa13.08□□□□□ -0.32
LINC00339-213ENST00000642137 WDR27A2RRH5 827 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 O00370 1275 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 SOX1O00570 391 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-213ENST00000642137 THAP12O43422 761 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 ADH1AP07327 375 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 SKILP12757 684 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 CPB1P15086 417 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 TNFAIP3P21580 790 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 BRD2P25440 801 aaKnown RBP13.07□□□□□ -0.32
LINC00339-213ENST00000642137 KLRC2P26717 231 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 CA8P35219 290 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 ARPP19P56211 112 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 CDR2Q01850 454 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 CCDC173Q0VFZ6 552 aa13.07□□□□□ -0.32
LINC00339-213ENST00000642137 CFAP221Q4G0U5 840 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms