RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SUPT20HL2P0C7V6 817 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 MYL6P60660 151 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 MCL1Q07820 350 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 MAPK6Q16659 721 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 SUPT20HL1Q3ZLR7 823 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 LRRC38Q5VT99 294 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 GPAT2Q6NUI2 795 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 CENPUQ71F23 418 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 TTLL6Q8N841 843 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 SLC35B2Q8TB61 432 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 ZNF75CPQ92670 426 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-233ENST00000642021 KLF6Q99612 283 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-233ENST00000642021 DHX33Q9H6R0 707 aaKnown RBP14.56□□□□□ -0.08
PHGDH-233ENST00000642021 CYLDQ9NQC7 956 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 TXLNGQ9NUQ3 528 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 ZNF214Q9UL59 606 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-233ENST00000642021 ZNRF3Q9ULT6 936 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 FARP1Q9Y4F1 1045 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-233ENST00000642021 WDR81Q562E7 1941 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 TCRBV7S3A2A0A539 114 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 ITGAVP06756 1048 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 WEE2P0C1S8 567 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 ADRA1DP25100 572 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 IL1R2P27930 398 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 ARL2P36404 184 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 NRLP54845 237 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 ANKRD20A2Q5SQ80 823 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 ANKRD20A1Q5TYW2 823 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 ANKRD20A3Q5VUR7 823 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 CEP128Q6ZU80 1094 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 BZW1Q7L1Q6 419 aaKnown RBP14.55□□□□□ -0.08
PHGDH-233ENST00000642021 KIAA0319LQ8IZA0 1049 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 RTKN2Q8IZC4 609 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 ZNF276Q8N554 614 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 PDGFDQ9GZP0 370 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-233ENST00000642021 SPATA31C2B4DYI2 1134 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 GOLGA8RI6L899 631 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 ASS1P00966 412 aaKnown RBP14.55□□□□□ -0.08
PHGDH-233ENST00000642021 ATP2A2P16615 1042 aaKnown RBP14.55□□□□□ -0.08
PHGDH-233ENST00000642021 PAX7P23759 505 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 RFC1P35251 1148 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-233ENST00000642021 NAMPTP43490 491 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 TGFB2P61812 414 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 EFHC2Q5JST6 749 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 SLFN12LQ6IEE8 588 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 FAM13CQ8NE31 585 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 ACTL9Q8TC94 416 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 CPT1BQ92523 772 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 TBC1D10AQ9BXI6 508 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 MTMR12Q9C0I1 747 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 PCDH9Q9HC56 1237 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 CISHQ9NSE2 258 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 PSMC3IPQ9P2W1 217 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-233ENST00000642021 SHOC2Q9UQ13 582 aa14.55□□□□□ -0.08
PHGDH-233ENST00000642021 SKAP2O75563 359 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-233ENST00000642021 CTCFP49711 727 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-233ENST00000642021 SLC8A3P57103 927 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 OTUD4Q01804 1114 aaKnown RBP14.54□□□□□ -0.08
PHGDH-233ENST00000642021 TMEM132BQ14DG7 1078 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 HIF1AQ16665 826 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 PARP6Q2NL67 630 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 HHATQ5VTY9 493 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 ZBTB33Q86T24 672 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 ZWILCHQ9H900 591 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 CYP39A1Q9NYL5 469 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 KANSL3Q9P2N6 904 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 SLC24A2Q9UI40 661 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 ZMYND8Q9ULU4 1186 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-233ENST00000642021 MAFBQ9Y5Q3 323 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-233ENST00000642021 PSME4Q14997 1843 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 LDHAP00338 332 aaKnown RBP14.54□□□□□ -0.08
PHGDH-233ENST00000642021 CALB1P05937 261 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 CD48P09326 243 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 EPHB2P29323 1055 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 GEMIN4P57678 1058 aaKnown RBP14.54□□□□□ -0.08
PHGDH-233ENST00000642021 TAF1BQ53T94 588 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-233ENST00000642021 C3orf62Q6ZUJ4 267 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 JOSD2Q8TAC2 188 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 ALG13Q9NP73 1137 aaKnown RBP14.54□□□□□ -0.08
PHGDH-233ENST00000642021 NPHS2Q9NP85 383 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 SENP1Q9P0U3 644 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 SNCAIPQ9Y6H5 919 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 KIAA1217Q5T5P2 1943 aa14.54□□□□□ -0.08
PHGDH-233ENST00000642021 RGPD3A6NKT7 1758 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-233ENST00000642021 RGPD4Q7Z3J3 1758 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 OATP04181 439 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 BACE1P56817 501 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 OVGP1Q12889 678 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 PYROXD1Q8WU10 500 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 MZB1Q8WU39 189 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 RAB3IPQ96QF0 476 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-233ENST00000642021 ZNF302Q9NR11 478 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 SLC17A7Q9P2U7 560 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 ARID2Q68CP9 1835 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 FER1L6Q2WGJ9 1857 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 FAM189A1O60320 539 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 CST8O60676 142 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 PEX11AO75192 247 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 PTPN7P35236 360 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 RPL22P35268 128 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms