RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 PRUNE1Q86TP1 453 aa18.87■□□□□ 0.61
PHGDH-226ENST00000641756 EMC1Q8N766 993 aa18.87■□□□□ 0.61
PHGDH-226ENST00000641756 UBA3Q8TBC4 463 aa18.87■□□□□ 0.61
PHGDH-226ENST00000641756 RAPGEF5Q92565 580 aa18.87■□□□□ 0.61
PHGDH-226ENST00000641756 RBM41Q96IZ5 413 aaKnown RBP18.87■□□□□ 0.61
PHGDH-226ENST00000641756 GCOM2Q9BZD3 368 aaPredicted RBP18.87■□□□□ 0.61
PHGDH-226ENST00000641756 NOVA2Q9UNW9 492 aaKnown RBP18.87■□□□□ 0.61
PHGDH-226ENST00000641756 HES2Q9Y543 173 aa18.87■□□□□ 0.61
PHGDH-226ENST00000641756 TRIP11Q15643 1979 aa18.87■□□□□ 0.61
PHGDH-226ENST00000641756 GAS8O95995 478 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 CYP2C9P11712 490 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 NDST1P52848 882 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 TLK2Q86UE8 772 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 XYLT1Q86Y38 959 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 FAXDC2Q96IV6 333 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 METTL5Q9NRN9 209 aaKnown RBP18.86■□□□□ 0.61
PHGDH-226ENST00000641756 CALCOCO1Q9P1Z2 691 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 WHRNQ9P202 907 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.86■□□□□ 0.61
PHGDH-226ENST00000641756 SIGLEC16A6NMB1 481 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 DCDC2CA8MYV0 355 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 PPEF2O14830 753 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 EIF3HO15372 352 aaKnown RBP eCLIP18.86■□□□□ 0.61
PHGDH-226ENST00000641756 F2P00734 622 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 IVDP26440 423 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 CETN2P41208 172 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 DCAF4L1Q3SXM0 396 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 ODF2Q5BJF6 829 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 AGBL2Q5U5Z8 902 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 SNF8Q96H20 258 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 ZMAT2Q96NC0 199 aaKnown RBP18.86■□□□□ 0.61
PHGDH-226ENST00000641756 HOMER3Q9NSC5 361 aa18.86■□□□□ 0.61
PHGDH-226ENST00000641756 BARX2Q9UMQ3 279 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-226ENST00000641756 LRRD1A4D1F6 860 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 NUDT17P0C025 328 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 ZNF865P0CJ78 1059 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-226ENST00000641756 ATF2P15336 505 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 CHKAP35790 457 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 ADCY8P40145 1251 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 ITGA8P53708 1063 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 EIF3BP55884 814 aaKnown RBP18.85■□□□□ 0.61
PHGDH-226ENST00000641756 GLRA4Q5JXX5 417 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 LRRC38Q5VT99 294 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 SPOCD1Q6ZMY3 1216 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 SYDE1Q6ZW31 735 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-226ENST00000641756 NIPA2Q8N8Q9 360 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 ZWILCHQ9H900 591 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 FEZ2Q9UHY8 353 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-226ENST00000641756 NRCAMQ92823 1304 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 ZNF236Q9UL36 1845 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 SMIM23A6NLE4 172 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 PIK3R2O00459 728 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 IVLP07476 585 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 VDRP11473 427 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 MFSD10Q14728 455 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 SLMAPQ14BN4 828 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 TAF1CQ15572 869 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-226ENST00000641756 SMTNL2Q2TAL5 461 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 SLC27A1Q6PCB7 646 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 ARFGAP1Q8N6T3 406 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 DNAJB3Q8WWF6 145 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 HAUS1Q96CS2 278 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 APOL6Q9BWW8 343 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 AAASQ9NRG9 546 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 DNAJC17Q9NVM6 304 aaKnown RBP18.85■□□□□ 0.61
PHGDH-226ENST00000641756 TUBGCP4Q9UGJ1 667 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 LCMT1Q9UIC8 334 aa18.85■□□□□ 0.61
PHGDH-226ENST00000641756 CAND2O75155 1236 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 RARGP13631 454 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 ITIH2P19823 946 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 CYP2B6P20813 491 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 CYP3A5P20815 502 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 GPD2P43304 727 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 ZNF200P98182 395 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-226ENST00000641756 BEX3Q00994 111 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 CNGA2Q16280 664 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 EMC10Q5UCC4 262 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 RHBDF2Q6PJF5 856 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 ZNF365Q70YC5 407 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 DNPEPQ9ULA0 475 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 NEU2Q9Y3R4 380 aa18.84■□□□□ 0.61
PHGDH-226ENST00000641756 TLDC2A0PJX2 215 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 RIPK2O43353 540 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 LRCH4O75427 683 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 MYL3P08590 195 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 MAGOHP61326 146 aaKnown RBP18.83■□□□□ 0.61
PHGDH-226ENST00000641756 INCA1Q0VD86 236 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 KCNT1Q5JUK3 1230 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 SMYD5Q6GMV2 418 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 GSTA5Q7RTV2 222 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 NT5DC4Q86YG4 428 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 C12orf29Q8N999 325 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 C18orf25Q96B23 403 aaPredicted RBP18.83■□□□□ 0.61
PHGDH-226ENST00000641756 SNX27Q96L92 541 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 PWWP2AQ96N64 755 aa18.83■□□□□ 0.61
PHGDH-226ENST00000641756 NXF3Q9H4D5 531 aaKnown RBP18.83■□□□□ 0.61
PHGDH-226ENST00000641756 SCN1AP35498 2009 aa18.83■□□□□ 0.6
PHGDH-226ENST00000641756 hCG_1818297A0A087WSY0 165 aa18.83■□□□□ 0.6
PHGDH-226ENST00000641756 SMIM35A0A1B0GVV1 85 aa18.83■□□□□ 0.6
PHGDH-226ENST00000641756 TJP3O95049 919 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms