RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	RRP12	Q5JTH9	1297 aa	Known RBP	7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	PRAMEF19	Q5SWL8	479 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	AKNAD1	Q5T1N1	836 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	FAM102B	Q5T8I3	360 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	VPS53	Q5VIR6	699 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	SLC39A5	Q6ZMH5	540 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	IQCA1	Q86XH1	822 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	ZZZ3	Q8IYH5	903 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	FAM227B	Q96M60	508 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	SEZ6L	Q9BYH1	1024 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	SEMA4A	Q9H3S1	761 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	TNFRSF12A	Q9NP84	129 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	ADD3	Q9UEY8	706 aa	Known RBP	7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	MSRA	Q9UJ68	235 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	ZHX1	Q9UKY1	873 aa	Predicted RBP	7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	DNAH12	Q6ZR08	3092 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	ALPK3	Q96L96	1907 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	MYH4	Q9Y623	1939 aa		7.14	□□□□□ -1.27
CASC19-238	ENST00000641523	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	7.13	□□□□□ -1.27
CASC19-238	ENST00000641523		B4DLN1	442 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	ZNF213	O14771	459 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	RFPL1	O75677	317 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	PGK1	P00558	417 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	ICAM1	P05362	532 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	ALAS1	P13196	640 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	RAC2	P15153	192 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	SDHA	P31040	664 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	ARL4A	P40617	200 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	TRAPPC10	P48553	1259 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	MRPL12	P52815	198 aa	Known RBP	7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	ACVR2B	Q13705	512 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	CLUL1	Q15846	466 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	TRIM60	Q495X7	471 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	GPATCH4	Q5T3I0	446 aa	Known RBP	7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	ANO1	Q5XXA6	986 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	ERAP2	Q6P179	960 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	CCDC174	Q6PII3	467 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	BTNL9	Q6UXG8	535 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	ARMCX2	Q7L311	632 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	TPH2	Q8IWU9	490 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	TRIM48	Q8IWZ4	208 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	TP53INP2	Q8IXH6	220 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	LILRA2	Q8N149	483 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	ERCC4	Q92889	916 aa	Predicted RBP	7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	GLT1D1	Q96MS3	346 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	A1CF	Q9NQ94	594 aa	Known RBP	7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	STARD7	Q9NQZ5	370 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	IL17RB	Q9NRM6	502 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	CCPG1	Q9ULG6	757 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	CTNND2	Q9UQB3	1225 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	DAAM1	Q9Y4D1	1078 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	RIPK3	Q9Y572	518 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	ELP1	O95163	1332 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	RAD50	Q92878	1312 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	SYNRG	Q9UMZ2	1314 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	COL11A1	P12107	1806 aa	Predicted RBP	7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	FRMPD3	Q5JV73	1810 aa		7.13	□□□□□ -1.27
CASC19-238	ENST00000641523	XPOT	O43592	962 aa	Known RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	CABYR	O75952	493 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	SNAI1	O95863	264 aa	Predicted RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	MME	P08473	750 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	RECQL	P46063	649 aa	Predicted RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	ACLY	P53396	1101 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	MORC3	Q14149	939 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	SIM2	Q14190	667 aa	Predicted RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	EPHA7	Q15375	998 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	IMMT	Q16891	758 aa	Known RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	ZNF589	Q86UQ0	364 aa	Predicted RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	DGKH	Q86XP1	1220 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	TCEAL8	Q8IYN2	117 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	CPA6	Q8N4T0	437 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	FAM133A	Q8N9E0	248 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	RUFY2	Q8WXA3	655 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	FERMT2	Q96AC1	680 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	TOX2	Q96NM4	488 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	KRT23	Q9C075	422 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	UPF3A	Q9H1J1	476 aa	Known RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	RANBP17	Q9H2T7	1088 aa	Known RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	NUDT5	Q9UKK9	219 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	HCFC2	Q9Y5Z7	792 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	ZNF536	O15090	1300 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	WDR19	Q8NEZ3	1342 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	TIMM44	O43615	452 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	NMT2	O60551	498 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	CYBB	P04839	570 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	CLTB	P09497	229 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	PF4V1	P10720	104 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	PDHB	P11177	359 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	TAL1	P17542	331 aa	Predicted RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	FNTB	P49356	437 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	GJA9	P57773	515 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	POU5F1	Q01860	360 aa	Known RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	TLE2	Q04725	743 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	PAN2	Q504Q3	1202 aa	Known RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	NXN	Q6DKJ4	435 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	FAM109B	Q6ICB4	259 aa	Predicted RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	PAQR3	Q6TCH7	311 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	CWC27	Q6UX04	472 aa	Known RBP	7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	ANKRD33	Q7Z3H0	272 aa		7.12	□□□□□ -1.27
CASC19-238	ENST00000641523	KLHDC9	Q8NEP7	349 aa		7.12	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms